Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Best1O88870 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Best1O88870 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Best1O88870 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Best1O88870 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Best1O88870 Asic1-205ENSMUST00000228185 1818 ntBASIC14.51□□□□□ -0.09
Best1O88870 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.51□□□□□ -0.09
Best1O88870 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Best1O88870 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Best1O88870 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Best1O88870 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Best1O88870 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Best1O88870 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.51□□□□□ -0.09
Best1O88870 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Best1O88870 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.51□□□□□ -0.09
Best1O88870 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.51□□□□□ -0.09
Best1O88870 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Best1O88870 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.51□□□□□ -0.09
Best1O88870 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Best1O88870 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Best1O88870 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Best1O88870 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Best1O88870 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Best1O88870 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Best1O88870 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Best1O88870 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.51□□□□□ -0.09
Best1O88870 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Best1O88870 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Best1O88870 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Best1O88870 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Best1O88870 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Best1O88870 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Best1O88870 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.51□□□□□ -0.09
Best1O88870 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Best1O88870 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Best1O88870 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Best1O88870 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Best1O88870 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Best1O88870 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Best1O88870 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Best1O88870 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Best1O88870 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Best1O88870 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Best1O88870 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Best1O88870 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Best1O88870 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Best1O88870 Gm2810-201ENSMUST00000118681 990 ntBASIC14.5□□□□□ -0.09
Best1O88870 Gm15920-201ENSMUST00000118998 402 ntBASIC14.5□□□□□ -0.09
Best1O88870 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Best1O88870 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Best1O88870 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Best1O88870 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.5□□□□□ -0.09
Best1O88870 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Best1O88870 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Best1O88870 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Best1O88870 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Best1O88870 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Best1O88870 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Best1O88870 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Best1O88870 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Best1O88870 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Best1O88870 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Best1O88870 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Best1O88870 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Best1O88870 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Best1O88870 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Best1O88870 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Best1O88870 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Best1O88870 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Best1O88870 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Best1O88870 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Best1O88870 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Best1O88870 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Best1O88870 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.49□□□□□ -0.09
Best1O88870 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Best1O88870 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Best1O88870 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.49□□□□□ -0.09
Best1O88870 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.49□□□□□ -0.09
Best1O88870 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Best1O88870 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Best1O88870 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Best1O88870 Gm22065-201ENSMUST00000103753 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm22066-201ENSMUST00000103761 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm24932-201ENSMUST00000103763 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm24115-201ENSMUST00000103799 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm22190-201ENSMUST00000103827 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm22191-201ENSMUST00000103831 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm24721-201ENSMUST00000103849 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm28018-201ENSMUST00000103869 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm26399-201ENSMUST00000103937 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.49□□□□□ -0.09
Best1O88870 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Best1O88870 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Best1O88870 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Best1O88870 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.49□□□□□ -0.09
Best1O88870 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.49□□□□□ -0.09
Best1O88870 Gm25349-201ENSMUST00000177728 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm23616-201ENSMUST00000177797 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm25871-201ENSMUST00000177816 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm24752-201ENSMUST00000178240 110 ntBASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms