Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cops3O88543 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cops3O88543 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cops3O88543 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cops3O88543 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cops3O88543 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cops3O88543 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.6□□□□□ -0.23
Cops3O88543 Gm14722-201ENSMUST00000118943 689 ntBASIC13.6□□□□□ -0.23
Cops3O88543 AA414768-201ENSMUST00000121924 1257 ntBASIC13.6□□□□□ -0.23
Cops3O88543 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.6□□□□□ -0.23
Cops3O88543 Rprl3-201ENSMUST00000157400 290 ntBASIC13.6□□□□□ -0.23
Cops3O88543 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.6□□□□□ -0.23
Cops3O88543 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cops3O88543 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.6□□□□□ -0.23
Cops3O88543 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.6□□□□□ -0.23
Cops3O88543 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cops3O88543 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cops3O88543 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cops3O88543 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cops3O88543 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cops3O88543 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Cops3O88543 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cops3O88543 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.6□□□□□ -0.23
Cops3O88543 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Cops3O88543 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cops3O88543 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.6□□□□□ -0.23
Cops3O88543 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cops3O88543 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cops3O88543 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.6□□□□□ -0.23
Cops3O88543 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cops3O88543 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cops3O88543 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.6□□□□□ -0.23
Cops3O88543 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cops3O88543 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.6□□□□□ -0.23
Cops3O88543 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cops3O88543 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.59□□□□□ -0.23
Cops3O88543 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops3O88543 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops3O88543 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.59□□□□□ -0.23
Cops3O88543 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops3O88543 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops3O88543 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops3O88543 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops3O88543 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Cops3O88543 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops3O88543 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cops3O88543 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops3O88543 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cops3O88543 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops3O88543 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Cops3O88543 Gm6659-201ENSMUST00000174752 547 ntBASIC13.59□□□□□ -0.23
Cops3O88543 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.59□□□□□ -0.23
Cops3O88543 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.59□□□□□ -0.23
Cops3O88543 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops3O88543 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops3O88543 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops3O88543 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cops3O88543 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cops3O88543 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
Cops3O88543 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops3O88543 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cops3O88543 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops3O88543 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cops3O88543 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops3O88543 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.59□□□□□ -0.23
Cops3O88543 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cops3O88543 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cops3O88543 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cops3O88543 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cops3O88543 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cops3O88543 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cops3O88543 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cops3O88543 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Cops3O88543 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cops3O88543 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cops3O88543 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cops3O88543 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cops3O88543 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cops3O88543 Gm27742-201ENSMUST00000184667 60 ntBASIC13.58□□□□□ -0.24
Cops3O88543 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.58□□□□□ -0.24
Cops3O88543 Gm19164-201ENSMUST00000210667 640 ntBASIC13.58□□□□□ -0.24
Cops3O88543 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cops3O88543 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.58□□□□□ -0.24
Cops3O88543 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cops3O88543 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cops3O88543 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cops3O88543 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cops3O88543 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cops3O88543 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.58□□□□□ -0.24
Cops3O88543 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cops3O88543 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cops3O88543 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cops3O88543 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cops3O88543 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.57□□□□□ -0.24
Cops3O88543 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cops3O88543 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.57□□□□□ -0.24
Cops3O88543 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cops3O88543 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cops3O88543 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cops3O88543 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms