Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pknox1O70477 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pknox1O70477 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pknox1O70477 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pknox1O70477 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pknox1O70477 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Pknox1O70477 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pknox1O70477 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pknox1O70477 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pknox1O70477 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pknox1O70477 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.08■□□□□ 0
Pknox1O70477 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.08■□□□□ 0
Pknox1O70477 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.08■□□□□ 0
Pknox1O70477 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Pknox1O70477 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.08■□□□□ 0
Pknox1O70477 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pknox1O70477 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pknox1O70477 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pknox1O70477 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Pknox1O70477 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pknox1O70477 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pknox1O70477 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pknox1O70477 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Pknox1O70477 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pknox1O70477 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.08■□□□□ 0
Pknox1O70477 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Pknox1O70477 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pknox1O70477 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.07■□□□□ 0
Pknox1O70477 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pknox1O70477 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pknox1O70477 Efs-202ENSMUST00000227037 2540 ntBASIC15.07■□□□□ 0
Pknox1O70477 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pknox1O70477 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pknox1O70477 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Pknox1O70477 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.07■□□□□ 0
Pknox1O70477 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pknox1O70477 Gm17807-201ENSMUST00000186869 298 ntBASIC15.07■□□□□ 0
Pknox1O70477 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pknox1O70477 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.07■□□□□ 0
Pknox1O70477 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pknox1O70477 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pknox1O70477 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.07■□□□□ 0
Pknox1O70477 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Pknox1O70477 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pknox1O70477 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pknox1O70477 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pknox1O70477 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pknox1O70477 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pknox1O70477 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Pknox1O70477 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pknox1O70477 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pknox1O70477 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Pknox1O70477 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pknox1O70477 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Pknox1O70477 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Pknox1O70477 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pknox1O70477 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.06■□□□□ 0
Pknox1O70477 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pknox1O70477 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pknox1O70477 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.06■□□□□ 0
Pknox1O70477 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.06■□□□□ 0
Pknox1O70477 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pknox1O70477 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Pknox1O70477 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pknox1O70477 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Pknox1O70477 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.06■□□□□ 0
Pknox1O70477 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pknox1O70477 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pknox1O70477 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pknox1O70477 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pknox1O70477 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.06■□□□□ 0
Pknox1O70477 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.06■□□□□ 0
Pknox1O70477 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pknox1O70477 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.06■□□□□ 0
Pknox1O70477 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pknox1O70477 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Pknox1O70477 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.06■□□□□ 0
Pknox1O70477 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Pknox1O70477 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ 0
Pknox1O70477 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Pknox1O70477 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Pknox1O70477 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pknox1O70477 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.05■□□□□ 0
Pknox1O70477 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pknox1O70477 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Pknox1O70477 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.05■□□□□ 0
Pknox1O70477 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Pknox1O70477 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pknox1O70477 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pknox1O70477 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pknox1O70477 Gm8318-201ENSMUST00000182954 872 ntBASIC15.05■□□□□ -0
Pknox1O70477 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pknox1O70477 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.05■□□□□ -0
Pknox1O70477 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pknox1O70477 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.05■□□□□ -0
Pknox1O70477 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pknox1O70477 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pknox1O70477 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pknox1O70477 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pknox1O70477 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms