Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim1O70400 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.93□□□□□ -0.02
Pdlim1O70400 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.93□□□□□ -0.02
Pdlim1O70400 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
Pdlim1O70400 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Pdlim1O70400 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim1O70400 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim1O70400 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim1O70400 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim1O70400 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.93□□□□□ -0.02
Pdlim1O70400 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim1O70400 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim1O70400 Gm13597-201ENSMUST00000121239 375 ntBASIC14.93□□□□□ -0.02
Pdlim1O70400 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.93□□□□□ -0.02
Pdlim1O70400 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.93□□□□□ -0.02
Pdlim1O70400 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pdlim1O70400 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim1O70400 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.93□□□□□ -0.02
Pdlim1O70400 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.93□□□□□ -0.02
Pdlim1O70400 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.93□□□□□ -0.02
Pdlim1O70400 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Pdlim1O70400 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim1O70400 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim1O70400 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim1O70400 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.93□□□□□ -0.02
Pdlim1O70400 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Pdlim1O70400 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim1O70400 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pdlim1O70400 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim1O70400 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim1O70400 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim1O70400 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim1O70400 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim1O70400 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim1O70400 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim1O70400 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim1O70400 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Pdlim1O70400 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Pdlim1O70400 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Pdlim1O70400 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim1O70400 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim1O70400 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim1O70400 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim1O70400 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.92□□□□□ -0.02
Pdlim1O70400 Gm15467-201ENSMUST00000120582 445 ntBASIC14.92□□□□□ -0.02
Pdlim1O70400 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Pdlim1O70400 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim1O70400 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim1O70400 Gm27525-201ENSMUST00000184465 107 ntBASIC14.92□□□□□ -0.02
Pdlim1O70400 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim1O70400 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.92□□□□□ -0.02
Pdlim1O70400 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.92□□□□□ -0.02
Pdlim1O70400 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim1O70400 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim1O70400 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim1O70400 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim1O70400 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim1O70400 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim1O70400 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim1O70400 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.92□□□□□ -0.02
Pdlim1O70400 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim1O70400 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim1O70400 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Pdlim1O70400 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim1O70400 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim1O70400 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim1O70400 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim1O70400 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.92□□□□□ -0.02
Pdlim1O70400 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.91□□□□□ -0.02
Pdlim1O70400 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim1O70400 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim1O70400 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Pdlim1O70400 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim1O70400 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim1O70400 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim1O70400 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim1O70400 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim1O70400 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim1O70400 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim1O70400 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.91□□□□□ -0.02
Pdlim1O70400 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim1O70400 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Pdlim1O70400 Gm11779-201ENSMUST00000118541 368 ntBASIC14.91□□□□□ -0.02
Pdlim1O70400 Gm12260-201ENSMUST00000122447 411 ntBASIC14.91□□□□□ -0.02
Pdlim1O70400 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.91□□□□□ -0.02
Pdlim1O70400 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.91□□□□□ -0.02
Pdlim1O70400 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.91□□□□□ -0.02
Pdlim1O70400 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.91□□□□□ -0.02
Pdlim1O70400 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.91□□□□□ -0.02
Pdlim1O70400 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim1O70400 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.91□□□□□ -0.02
Pdlim1O70400 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim1O70400 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.91□□□□□ -0.02
Pdlim1O70400 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim1O70400 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim1O70400 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim1O70400 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim1O70400 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim1O70400 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pdlim1O70400 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms