Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rdh5O55240 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rdh5O55240 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rdh5O55240 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rdh5O55240 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rdh5O55240 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rdh5O55240 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rdh5O55240 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh5O55240 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh5O55240 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh5O55240 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh5O55240 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rdh5O55240 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.34□□□□□ -0.11
Rdh5O55240 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Rdh5O55240 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh5O55240 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh5O55240 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.34□□□□□ -0.11
Rdh5O55240 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh5O55240 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh5O55240 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh5O55240 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh5O55240 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.34□□□□□ -0.11
Rdh5O55240 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rdh5O55240 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.34□□□□□ -0.11
Rdh5O55240 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh5O55240 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh5O55240 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rdh5O55240 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh5O55240 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh5O55240 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh5O55240 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh5O55240 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Rdh5O55240 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.34□□□□□ -0.11
Rdh5O55240 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rdh5O55240 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.34□□□□□ -0.11
Rdh5O55240 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rdh5O55240 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rdh5O55240 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.33□□□□□ -0.12
Rdh5O55240 Gm1401-201ENSMUST00000122048 772 ntBASIC14.33□□□□□ -0.12
Rdh5O55240 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh5O55240 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh5O55240 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.33□□□□□ -0.12
Rdh5O55240 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh5O55240 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh5O55240 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.33□□□□□ -0.12
Rdh5O55240 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.33□□□□□ -0.12
Rdh5O55240 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh5O55240 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh5O55240 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh5O55240 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
Rdh5O55240 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Rdh5O55240 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh5O55240 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.33□□□□□ -0.12
Rdh5O55240 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh5O55240 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.33□□□□□ -0.12
Rdh5O55240 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh5O55240 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh5O55240 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh5O55240 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh5O55240 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh5O55240 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh5O55240 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rdh5O55240 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh5O55240 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh5O55240 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh5O55240 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh5O55240 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh5O55240 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rdh5O55240 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.32□□□□□ -0.12
Rdh5O55240 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.32□□□□□ -0.12
Rdh5O55240 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.32□□□□□ -0.12
Rdh5O55240 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.32□□□□□ -0.12
Rdh5O55240 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.32□□□□□ -0.12
Rdh5O55240 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.32□□□□□ -0.12
Rdh5O55240 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Rdh5O55240 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.32□□□□□ -0.12
Rdh5O55240 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.32□□□□□ -0.12
Rdh5O55240 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms