Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf13O54965 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Rnf13O54965 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf13O54965 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.75□□□□□ -0.21
Rnf13O54965 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf13O54965 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf13O54965 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf13O54965 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.75□□□□□ -0.21
Rnf13O54965 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Rnf13O54965 Gm9172-201ENSMUST00000212092 954 ntBASIC13.75□□□□□ -0.21
Rnf13O54965 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf13O54965 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.75□□□□□ -0.21
Rnf13O54965 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.75□□□□□ -0.21
Rnf13O54965 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf13O54965 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf13O54965 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf13O54965 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf13O54965 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Rnf13O54965 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf13O54965 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf13O54965 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf13O54965 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf13O54965 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf13O54965 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf13O54965 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Rnf13O54965 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Rnf13O54965 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf13O54965 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf13O54965 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.74□□□□□ -0.21
Rnf13O54965 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf13O54965 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf13O54965 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Rnf13O54965 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.74□□□□□ -0.21
Rnf13O54965 Gm12134-201ENSMUST00000122109 520 ntBASIC13.74□□□□□ -0.21
Rnf13O54965 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf13O54965 Gm23634-201ENSMUST00000175071 91 ntBASIC13.74□□□□□ -0.21
Rnf13O54965 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.74□□□□□ -0.21
Rnf13O54965 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.74□□□□□ -0.21
Rnf13O54965 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf13O54965 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf13O54965 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf13O54965 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf13O54965 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
Rnf13O54965 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf13O54965 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf13O54965 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf13O54965 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf13O54965 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.74□□□□□ -0.21
Rnf13O54965 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf13O54965 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Rnf13O54965 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
Rnf13O54965 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Rnf13O54965 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf13O54965 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf13O54965 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf13O54965 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Rnf13O54965 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf13O54965 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf13O54965 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Rnf13O54965 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf13O54965 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.73□□□□□ -0.21
Rnf13O54965 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf13O54965 Gm19164-201ENSMUST00000210667 640 ntBASIC13.73□□□□□ -0.21
Rnf13O54965 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.73□□□□□ -0.21
Rnf13O54965 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.73□□□□□ -0.21
Rnf13O54965 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf13O54965 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf13O54965 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf13O54965 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf13O54965 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.73□□□□□ -0.21
Rnf13O54965 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf13O54965 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf13O54965 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf13O54965 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf13O54965 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf13O54965 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf13O54965 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.73□□□□□ -0.21
Rnf13O54965 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf13O54965 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf13O54965 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf13O54965 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.73□□□□□ -0.21
Rnf13O54965 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf13O54965 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Rnf13O54965 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf13O54965 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf13O54965 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf13O54965 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf13O54965 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf13O54965 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Rnf13O54965 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Rnf13O54965 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.72□□□□□ -0.21
Rnf13O54965 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf13O54965 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf13O54965 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf13O54965 AA414768-201ENSMUST00000121924 1257 ntBASIC13.72□□□□□ -0.21
Rnf13O54965 Rprl3-201ENSMUST00000157400 290 ntBASIC13.72□□□□□ -0.21
Rnf13O54965 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.72□□□□□ -0.21
Rnf13O54965 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.72□□□□□ -0.21
Rnf13O54965 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf13O54965 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms