Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Gm6415-201ENSMUST00000118488 348 ntBASIC15.26■□□□□ 0.03
Phox2bO35690 Gm13453-201ENSMUST00000118708 357 ntBASIC15.26■□□□□ 0.03
Phox2bO35690 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Phox2bO35690 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Phox2bO35690 Gm15487-201ENSMUST00000122373 465 ntBASIC15.26■□□□□ 0.03
Phox2bO35690 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.26■□□□□ 0.03
Phox2bO35690 Gm23984-201ENSMUST00000157139 203 ntBASIC15.26■□□□□ 0.03
Phox2bO35690 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.26■□□□□ 0.03
Phox2bO35690 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Phox2bO35690 Gm45878-201ENSMUST00000211839 241 ntBASIC15.26■□□□□ 0.03
Phox2bO35690 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
Phox2bO35690 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.26■□□□□ 0.03
Phox2bO35690 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Phox2bO35690 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Phox2bO35690 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.26■□□□□ 0.03
Phox2bO35690 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Phox2bO35690 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.26■□□□□ 0.03
Phox2bO35690 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Phox2bO35690 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Phox2bO35690 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Phox2bO35690 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Phox2bO35690 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Phox2bO35690 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Phox2bO35690 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Phox2bO35690 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Phox2bO35690 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Phox2bO35690 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Phox2bO35690 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Phox2bO35690 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Phox2bO35690 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Phox2bO35690 Gm25287-201ENSMUST00000103846 110 ntBASIC15.25■□□□□ 0.03
Phox2bO35690 Gm22918-201ENSMUST00000103855 110 ntBASIC15.25■□□□□ 0.03
Phox2bO35690 Gm15693-201ENSMUST00000120470 637 ntBASIC15.25■□□□□ 0.03
Phox2bO35690 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC15.25■□□□□ 0.03
Phox2bO35690 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Phox2bO35690 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.25■□□□□ 0.03
Phox2bO35690 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC15.25■□□□□ 0.03
Phox2bO35690 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.25■□□□□ 0.03
Phox2bO35690 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Phox2bO35690 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Phox2bO35690 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Phox2bO35690 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Phox2bO35690 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.25■□□□□ 0.03
Phox2bO35690 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Phox2bO35690 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Phox2bO35690 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Phox2bO35690 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Phox2bO35690 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
Phox2bO35690 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Phox2bO35690 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.25■□□□□ 0.03
Phox2bO35690 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Phox2bO35690 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Phox2bO35690 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC15.25■□□□□ 0.03
Phox2bO35690 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Phox2bO35690 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Phox2bO35690 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Phox2bO35690 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.25■□□□□ 0.03
Phox2bO35690 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Phox2bO35690 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Phox2bO35690 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.25■□□□□ 0.03
Phox2bO35690 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Phox2bO35690 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Phox2bO35690 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Phox2bO35690 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Phox2bO35690 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Phox2bO35690 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Phox2bO35690 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Phox2bO35690 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.24■□□□□ 0.03
Phox2bO35690 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Phox2bO35690 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Phox2bO35690 Gm11478-201ENSMUST00000117851 599 ntBASIC15.24■□□□□ 0.03
Phox2bO35690 Gm14363-201ENSMUST00000122304 409 ntBASIC15.24■□□□□ 0.03
Phox2bO35690 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.24■□□□□ 0.03
Phox2bO35690 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Phox2bO35690 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Phox2bO35690 Gm45059-201ENSMUST00000205558 1077 ntBASIC15.24■□□□□ 0.03
Phox2bO35690 Gm45574-201ENSMUST00000210921 331 ntBASIC15.24■□□□□ 0.03
Phox2bO35690 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC15.24■□□□□ 0.03
Phox2bO35690 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Phox2bO35690 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.24■□□□□ 0.03
Phox2bO35690 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Phox2bO35690 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Phox2bO35690 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
Phox2bO35690 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Phox2bO35690 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Phox2bO35690 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Phox2bO35690 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Phox2bO35690 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Phox2bO35690 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.24■□□□□ 0.03
Phox2bO35690 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Phox2bO35690 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Phox2bO35690 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Phox2bO35690 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
Phox2bO35690 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Phox2bO35690 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Phox2bO35690 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Phox2bO35690 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Phox2bO35690 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Phox2bO35690 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Phox2bO35690 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms