Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.05■□□□□ 0.32
Stx1aO35526 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Stx1aO35526 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Stx1aO35526 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Stx1aO35526 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Stx1aO35526 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Stx1aO35526 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Stx1aO35526 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Stx1aO35526 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Stx1aO35526 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Stx1aO35526 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Stx1aO35526 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Stx1aO35526 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.04■□□□□ 0.32
Stx1aO35526 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Stx1aO35526 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Stx1aO35526 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.04■□□□□ 0.32
Stx1aO35526 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Stx1aO35526 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Stx1aO35526 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Stx1aO35526 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Stx1aO35526 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Stx1aO35526 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.04■□□□□ 0.32
Stx1aO35526 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.04■□□□□ 0.32
Stx1aO35526 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.04■□□□□ 0.32
Stx1aO35526 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.04■□□□□ 0.32
Stx1aO35526 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Stx1aO35526 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Stx1aO35526 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Stx1aO35526 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Stx1aO35526 Celf4-206ENSMUST00000224553 1729 ntBASIC17.04■□□□□ 0.32
Stx1aO35526 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Stx1aO35526 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC17.04■□□□□ 0.32
Stx1aO35526 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Stx1aO35526 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Stx1aO35526 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Stx1aO35526 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Stx1aO35526 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Stx1aO35526 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stx1aO35526 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stx1aO35526 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stx1aO35526 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Stx1aO35526 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Stx1aO35526 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stx1aO35526 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stx1aO35526 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stx1aO35526 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stx1aO35526 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stx1aO35526 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stx1aO35526 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Stx1aO35526 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stx1aO35526 Gm25016-201ENSMUST00000158399 131 ntBASIC17.03■□□□□ 0.32
Stx1aO35526 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stx1aO35526 Gm10231-201ENSMUST00000181584 441 ntBASIC17.03■□□□□ 0.32
Stx1aO35526 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stx1aO35526 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.03■□□□□ 0.32
Stx1aO35526 Gm10175-202ENSMUST00000208752 441 ntBASIC17.03■□□□□ 0.32
Stx1aO35526 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stx1aO35526 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stx1aO35526 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stx1aO35526 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stx1aO35526 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stx1aO35526 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stx1aO35526 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stx1aO35526 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Stx1aO35526 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Stx1aO35526 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Stx1aO35526 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Stx1aO35526 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stx1aO35526 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stx1aO35526 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Stx1aO35526 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Stx1aO35526 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stx1aO35526 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Stx1aO35526 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Stx1aO35526 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.03■□□□□ 0.32
Stx1aO35526 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC17.02■□□□□ 0.32
Stx1aO35526 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.02■□□□□ 0.32
Stx1aO35526 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Stx1aO35526 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Stx1aO35526 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Stx1aO35526 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Stx1aO35526 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.02■□□□□ 0.32
Stx1aO35526 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Stx1aO35526 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Stx1aO35526 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Stx1aO35526 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.02■□□□□ 0.32
Stx1aO35526 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Stx1aO35526 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.02■□□□□ 0.32
Stx1aO35526 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Stx1aO35526 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Stx1aO35526 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Stx1aO35526 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Stx1aO35526 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.02■□□□□ 0.32
Stx1aO35526 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Stx1aO35526 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Stx1aO35526 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Stx1aO35526 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Stx1aO35526 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Stx1aO35526 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Stx1aO35526 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms