Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac1O09106 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac1O09106 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac1O09106 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac1O09106 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac1O09106 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac1O09106 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.03■□□□□ 0.48
Hdac1O09106 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.03■□□□□ 0.48
Hdac1O09106 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.03■□□□□ 0.48
Hdac1O09106 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac1O09106 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac1O09106 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac1O09106 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC18.03■□□□□ 0.48
Hdac1O09106 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac1O09106 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac1O09106 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac1O09106 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Hdac1O09106 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac1O09106 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac1O09106 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hdac1O09106 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hdac1O09106 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Hdac1O09106 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hdac1O09106 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC18.02■□□□□ 0.48
Hdac1O09106 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Hdac1O09106 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hdac1O09106 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hdac1O09106 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hdac1O09106 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
Hdac1O09106 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hdac1O09106 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hdac1O09106 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hdac1O09106 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hdac1O09106 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.02■□□□□ 0.47
Hdac1O09106 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC18.02■□□□□ 0.47
Hdac1O09106 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hdac1O09106 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hdac1O09106 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Hdac1O09106 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Hdac1O09106 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hdac1O09106 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hdac1O09106 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hdac1O09106 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hdac1O09106 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Hdac1O09106 Gm27357-201ENSMUST00000183754 135 ntBASIC18.01■□□□□ 0.47
Hdac1O09106 Gm27646-201ENSMUST00000183989 110 ntBASIC18.01■□□□□ 0.47
Hdac1O09106 Gm27704-201ENSMUST00000185094 107 ntBASIC18.01■□□□□ 0.47
Hdac1O09106 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hdac1O09106 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hdac1O09106 Gm43767-201ENSMUST00000198933 381 ntBASIC18.01■□□□□ 0.47
Hdac1O09106 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Hdac1O09106 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hdac1O09106 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.01■□□□□ 0.47
Hdac1O09106 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hdac1O09106 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Hdac1O09106 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC18.01■□□□□ 0.47
Hdac1O09106 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hdac1O09106 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hdac1O09106 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Hdac1O09106 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hdac1O09106 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hdac1O09106 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hdac1O09106 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hdac1O09106 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC18■□□□□ 0.47
Hdac1O09106 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC18■□□□□ 0.47
Hdac1O09106 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hdac1O09106 Gm21451-201ENSMUST00000111062 2775 ntBASIC18■□□□□ 0.47
Hdac1O09106 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Hdac1O09106 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC18■□□□□ 0.47
Hdac1O09106 Gm29361-201ENSMUST00000183323 2000 ntBASIC18■□□□□ 0.47
Hdac1O09106 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hdac1O09106 Gm10499-201ENSMUST00000174094 934 ntBASIC18■□□□□ 0.47
Hdac1O09106 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hdac1O09106 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Hdac1O09106 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hdac1O09106 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Hdac1O09106 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hdac1O09106 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Hdac1O09106 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Hdac1O09106 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hdac1O09106 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hdac1O09106 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hdac1O09106 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hdac1O09106 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hdac1O09106 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Hdac1O09106 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Hdac1O09106 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Hdac1O09106 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hdac1O09106 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hdac1O09106 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hdac1O09106 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hdac1O09106 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hdac1O09106 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hdac1O09106 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.99■□□□□ 0.47
Hdac1O09106 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hdac1O09106 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Hdac1O09106 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hdac1O09106 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hdac1O09106 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hdac1O09106 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms