Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trove2O08848 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trove2O08848 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.59■□□□□ 0.09
Trove2O08848 Gm12134-201ENSMUST00000122109 520 ntBASIC15.59■□□□□ 0.09
Trove2O08848 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trove2O08848 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.59■□□□□ 0.09
Trove2O08848 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.59■□□□□ 0.09
Trove2O08848 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trove2O08848 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trove2O08848 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Trove2O08848 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trove2O08848 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trove2O08848 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trove2O08848 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
Trove2O08848 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Trove2O08848 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trove2O08848 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trove2O08848 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trove2O08848 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trove2O08848 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trove2O08848 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trove2O08848 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.58■□□□□ 0.08
Trove2O08848 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trove2O08848 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trove2O08848 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trove2O08848 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trove2O08848 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Trove2O08848 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trove2O08848 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trove2O08848 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trove2O08848 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trove2O08848 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.58■□□□□ 0.08
Trove2O08848 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.58■□□□□ 0.08
Trove2O08848 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.58■□□□□ 0.08
Trove2O08848 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trove2O08848 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trove2O08848 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trove2O08848 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trove2O08848 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trove2O08848 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trove2O08848 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trove2O08848 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trove2O08848 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trove2O08848 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trove2O08848 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trove2O08848 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trove2O08848 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trove2O08848 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trove2O08848 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trove2O08848 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trove2O08848 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trove2O08848 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trove2O08848 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trove2O08848 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trove2O08848 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trove2O08848 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trove2O08848 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trove2O08848 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trove2O08848 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trove2O08848 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trove2O08848 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trove2O08848 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trove2O08848 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trove2O08848 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trove2O08848 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Trove2O08848 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trove2O08848 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trove2O08848 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trove2O08848 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trove2O08848 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trove2O08848 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trove2O08848 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trove2O08848 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trove2O08848 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trove2O08848 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trove2O08848 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trove2O08848 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trove2O08848 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trove2O08848 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trove2O08848 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trove2O08848 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trove2O08848 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Trove2O08848 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trove2O08848 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trove2O08848 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trove2O08848 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trove2O08848 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trove2O08848 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trove2O08848 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trove2O08848 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trove2O08848 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trove2O08848 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trove2O08848 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trove2O08848 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trove2O08848 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trove2O08848 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trove2O08848 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trove2O08848 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trove2O08848 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trove2O08848 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms