Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc2O08811 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc2O08811 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc2O08811 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.5■□□□□ 0.07
Ercc2O08811 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.5■□□□□ 0.07
Ercc2O08811 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.5■□□□□ 0.07
Ercc2O08811 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc2O08811 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc2O08811 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Ercc2O08811 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.5■□□□□ 0.07
Ercc2O08811 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc2O08811 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Ercc2O08811 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Ercc2O08811 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc2O08811 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc2O08811 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc2O08811 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc2O08811 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc2O08811 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.49■□□□□ 0.07
Ercc2O08811 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc2O08811 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ercc2O08811 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc2O08811 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Ercc2O08811 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc2O08811 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc2O08811 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Ercc2O08811 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc2O08811 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc2O08811 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc2O08811 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.49■□□□□ 0.07
Ercc2O08811 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc2O08811 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc2O08811 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc2O08811 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc2O08811 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Ercc2O08811 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc2O08811 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc2O08811 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc2O08811 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc2O08811 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc2O08811 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc2O08811 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Ercc2O08811 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc2O08811 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc2O08811 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc2O08811 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc2O08811 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc2O08811 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Ercc2O08811 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Ercc2O08811 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc2O08811 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc2O08811 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc2O08811 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc2O08811 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Ercc2O08811 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc2O08811 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc2O08811 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc2O08811 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc2O08811 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc2O08811 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
Ercc2O08811 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.48■□□□□ 0.07
Ercc2O08811 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc2O08811 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc2O08811 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.48■□□□□ 0.07
Ercc2O08811 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.48■□□□□ 0.07
Ercc2O08811 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc2O08811 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.48■□□□□ 0.07
Ercc2O08811 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Ercc2O08811 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc2O08811 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.48■□□□□ 0.07
Ercc2O08811 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc2O08811 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Ercc2O08811 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc2O08811 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Ercc2O08811 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc2O08811 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc2O08811 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Ercc2O08811 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc2O08811 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc2O08811 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.48■□□□□ 0.07
Ercc2O08811 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc2O08811 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.48■□□□□ 0.07
Ercc2O08811 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc2O08811 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc2O08811 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc2O08811 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc2O08811 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc2O08811 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Ercc2O08811 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc2O08811 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc2O08811 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc2O08811 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ercc2O08811 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc2O08811 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc2O08811 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc2O08811 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Ercc2O08811 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc2O08811 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc2O08811 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.47■□□□□ 0.07
Ercc2O08811 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms