Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf3O08791 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf3O08791 Gm13616-201ENSMUST00000120600 222 ntBASIC15.73■□□□□ 0.11
Ebf3O08791 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.73■□□□□ 0.11
Ebf3O08791 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Ebf3O08791 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf3O08791 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf3O08791 Gm44335-201ENSMUST00000196879 141 ntBASIC15.73■□□□□ 0.11
Ebf3O08791 Gm44297-201ENSMUST00000198304 141 ntBASIC15.73■□□□□ 0.11
Ebf3O08791 Gm44346-201ENSMUST00000198851 141 ntBASIC15.73■□□□□ 0.11
Ebf3O08791 Gm45612-201ENSMUST00000211320 160 ntBASIC15.73■□□□□ 0.11
Ebf3O08791 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf3O08791 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf3O08791 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf3O08791 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf3O08791 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf3O08791 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Ebf3O08791 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.73■□□□□ 0.11
Ebf3O08791 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf3O08791 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Ebf3O08791 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ebf3O08791 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.73■□□□□ 0.11
Ebf3O08791 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Ebf3O08791 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf3O08791 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf3O08791 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ebf3O08791 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ebf3O08791 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ebf3O08791 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ebf3O08791 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.72■□□□□ 0.11
Ebf3O08791 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ebf3O08791 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ebf3O08791 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ebf3O08791 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ebf3O08791 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ebf3O08791 Thap2-203ENSMUST00000218989 527 ntBASIC15.72■□□□□ 0.11
Ebf3O08791 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ebf3O08791 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ebf3O08791 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ebf3O08791 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ebf3O08791 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ebf3O08791 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ebf3O08791 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Ebf3O08791 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ebf3O08791 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ebf3O08791 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ebf3O08791 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ebf3O08791 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.72■□□□□ 0.11
Ebf3O08791 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf3O08791 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf3O08791 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf3O08791 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.71■□□□□ 0.11
Ebf3O08791 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf3O08791 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf3O08791 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Ebf3O08791 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf3O08791 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf3O08791 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf3O08791 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.71■□□□□ 0.11
Ebf3O08791 Gm11745-201ENSMUST00000121669 448 ntBASIC15.71■□□□□ 0.11
Ebf3O08791 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.71■□□□□ 0.11
Ebf3O08791 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.71■□□□□ 0.11
Ebf3O08791 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf3O08791 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf3O08791 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ebf3O08791 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ebf3O08791 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf3O08791 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf3O08791 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf3O08791 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Ebf3O08791 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ebf3O08791 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Ebf3O08791 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Ebf3O08791 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.71■□□□□ 0.1
Ebf3O08791 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ebf3O08791 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf3O08791 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf3O08791 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf3O08791 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ebf3O08791 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf3O08791 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.7■□□□□ 0.1
Ebf3O08791 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf3O08791 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.7■□□□□ 0.1
Ebf3O08791 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf3O08791 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf3O08791 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf3O08791 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.7■□□□□ 0.1
Ebf3O08791 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ebf3O08791 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf3O08791 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf3O08791 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf3O08791 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf3O08791 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf3O08791 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.7■□□□□ 0.1
Ebf3O08791 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf3O08791 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ebf3O08791 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Ebf3O08791 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ebf3O08791 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf3O08791 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms