Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Dctn1O08788 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.62■□□□□ 0.57
Dctn1O08788 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Dctn1O08788 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dctn1O08788 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Dctn1O08788 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC18.62■□□□□ 0.57
Dctn1O08788 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dctn1O08788 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dctn1O08788 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dctn1O08788 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dctn1O08788 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Dctn1O08788 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Dctn1O08788 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dctn1O08788 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.61■□□□□ 0.57
Dctn1O08788 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Dctn1O08788 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.61■□□□□ 0.57
Dctn1O08788 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dctn1O08788 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.61■□□□□ 0.57
Dctn1O08788 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Dctn1O08788 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dctn1O08788 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Dctn1O08788 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dctn1O08788 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dctn1O08788 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.61■□□□□ 0.57
Dctn1O08788 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.61■□□□□ 0.57
Dctn1O08788 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Dctn1O08788 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.61■□□□□ 0.57
Dctn1O08788 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dctn1O08788 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Dctn1O08788 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Dctn1O08788 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Dctn1O08788 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Dctn1O08788 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Dctn1O08788 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Dctn1O08788 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Dctn1O08788 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.6■□□□□ 0.57
Dctn1O08788 Gm42934-201ENSMUST00000196920 1345 ntBASIC18.6■□□□□ 0.57
Dctn1O08788 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Dctn1O08788 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Dctn1O08788 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Dctn1O08788 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC18.6■□□□□ 0.57
Dctn1O08788 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Dctn1O08788 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Dctn1O08788 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Dctn1O08788 Gm5745-201ENSMUST00000183748 313 ntBASIC18.6■□□□□ 0.57
Dctn1O08788 Gm27920-201ENSMUST00000183953 96 ntBASIC18.6■□□□□ 0.57
Dctn1O08788 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC18.6■□□□□ 0.57
Dctn1O08788 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Dctn1O08788 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC18.6■□□□□ 0.57
Dctn1O08788 AC164567.1-201ENSMUST00000219185 960 ntBASIC18.6■□□□□ 0.57
Dctn1O08788 Gm6888-201ENSMUST00000221983 706 ntBASIC18.6■□□□□ 0.57
Dctn1O08788 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Dctn1O08788 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Dctn1O08788 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Dctn1O08788 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Dctn1O08788 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Dctn1O08788 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Dctn1O08788 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Dctn1O08788 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Dctn1O08788 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Dctn1O08788 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Dctn1O08788 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Dctn1O08788 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dctn1O08788 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dctn1O08788 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dctn1O08788 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Dctn1O08788 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Dctn1O08788 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Dctn1O08788 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Dctn1O08788 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Dctn1O08788 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dctn1O08788 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Dctn1O08788 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dctn1O08788 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dctn1O08788 Gm8410-201ENSMUST00000117225 605 ntBASIC18.59■□□□□ 0.57
Dctn1O08788 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Dctn1O08788 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Dctn1O08788 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dctn1O08788 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Dctn1O08788 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC18.59■□□□□ 0.57
Dctn1O08788 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Dctn1O08788 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dctn1O08788 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dctn1O08788 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dctn1O08788 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dctn1O08788 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dctn1O08788 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.59■□□□□ 0.57
Dctn1O08788 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Dctn1O08788 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dctn1O08788 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Dctn1O08788 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Dctn1O08788 Gm13233-201ENSMUST00000118760 1443 ntBASIC18.58■□□□□ 0.57
Dctn1O08788 Gm13244-201ENSMUST00000118855 1446 ntBASIC18.58■□□□□ 0.57
Dctn1O08788 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Dctn1O08788 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Dctn1O08788 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Dctn1O08788 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Dctn1O08788 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Dctn1O08788 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Dctn1O08788 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms