Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Polr2jO08740 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Polr2jO08740 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Polr2jO08740 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Polr2jO08740 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Polr2jO08740 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Polr2jO08740 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Polr2jO08740 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Polr2jO08740 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Polr2jO08740 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Polr2jO08740 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Polr2jO08740 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.55□□□□□ -0.08
Polr2jO08740 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.55□□□□□ -0.08
Polr2jO08740 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Polr2jO08740 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Polr2jO08740 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.54□□□□□ -0.08
Polr2jO08740 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.54□□□□□ -0.08
Polr2jO08740 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Polr2jO08740 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Polr2jO08740 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Polr2jO08740 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Polr2jO08740 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Polr2jO08740 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Polr2jO08740 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Polr2jO08740 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.54□□□□□ -0.08
Polr2jO08740 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Polr2jO08740 Gm4459-201ENSMUST00000118750 468 ntBASIC14.54□□□□□ -0.08
Polr2jO08740 Gm12497-201ENSMUST00000138778 237 ntBASIC14.54□□□□□ -0.08
Polr2jO08740 Gm6659-201ENSMUST00000174752 547 ntBASIC14.54□□□□□ -0.08
Polr2jO08740 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.54□□□□□ -0.08
Polr2jO08740 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Polr2jO08740 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Polr2jO08740 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Polr2jO08740 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Polr2jO08740 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Polr2jO08740 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Polr2jO08740 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Polr2jO08740 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Polr2jO08740 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Polr2jO08740 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Polr2jO08740 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Polr2jO08740 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Polr2jO08740 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Polr2jO08740 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Polr2jO08740 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Polr2jO08740 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Polr2jO08740 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Polr2jO08740 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Polr2jO08740 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Polr2jO08740 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Polr2jO08740 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Polr2jO08740 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.53□□□□□ -0.08
Polr2jO08740 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Polr2jO08740 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Polr2jO08740 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.53□□□□□ -0.08
Polr2jO08740 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Polr2jO08740 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.53□□□□□ -0.08
Polr2jO08740 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Polr2jO08740 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Polr2jO08740 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Polr2jO08740 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Polr2jO08740 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Polr2jO08740 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Polr2jO08740 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Polr2jO08740 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Polr2jO08740 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.53□□□□□ -0.08
Polr2jO08740 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.53□□□□□ -0.08
Polr2jO08740 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Polr2jO08740 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.53□□□□□ -0.08
Polr2jO08740 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Polr2jO08740 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Polr2jO08740 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Polr2jO08740 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Polr2jO08740 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Polr2jO08740 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Polr2jO08740 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Polr2jO08740 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Polr2jO08740 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Polr2jO08740 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Polr2jO08740 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Polr2jO08740 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.53□□□□□ -0.08
Polr2jO08740 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Polr2jO08740 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Polr2jO08740 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Polr2jO08740 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Polr2jO08740 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.52□□□□□ -0.08
Polr2jO08740 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Polr2jO08740 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.52□□□□□ -0.08
Polr2jO08740 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.52□□□□□ -0.08
Polr2jO08740 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.52□□□□□ -0.08
Polr2jO08740 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Polr2jO08740 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Polr2jO08740 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.52□□□□□ -0.08
Polr2jO08740 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Polr2jO08740 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
Polr2jO08740 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Polr2jO08740 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Polr2jO08740 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Polr2jO08740 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.52□□□□□ -0.09
Polr2jO08740 Gm27867-201ENSMUST00000184778 125 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms