Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf11bO08712 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf11bO08712 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf11bO08712 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf11bO08712 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf11bO08712 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf11bO08712 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf11bO08712 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf11bO08712 Gm10499-201ENSMUST00000174094 934 ntBASIC15.39■□□□□ 0.05
Tnfrsf11bO08712 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
Tnfrsf11bO08712 Gm7977-201ENSMUST00000193787 748 ntBASIC15.39■□□□□ 0.05
Tnfrsf11bO08712 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf11bO08712 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.39■□□□□ 0.05
Tnfrsf11bO08712 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf11bO08712 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf11bO08712 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf11bO08712 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf11bO08712 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Tnfrsf11bO08712 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.38■□□□□ 0.05
Tnfrsf11bO08712 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Gm13418-201ENSMUST00000119097 944 ntBASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Gm28033-201ENSMUST00000184224 96 ntBASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tnfrsf11bO08712 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tnfrsf11bO08712 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tnfrsf11bO08712 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Tnfrsf11bO08712 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tnfrsf11bO08712 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tnfrsf11bO08712 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tnfrsf11bO08712 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tnfrsf11bO08712 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tnfrsf11bO08712 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.36■□□□□ 0.05
Tnfrsf11bO08712 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tnfrsf11bO08712 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Tnfrsf11bO08712 Gm44357-201ENSMUST00000195897 142 ntBASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms