Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.83□□□□□ -0.2
Shisa8J3QNX5 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shisa8J3QNX5 Gm18032-201ENSMUST00000222541 538 ntBASIC13.83□□□□□ -0.2
Shisa8J3QNX5 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shisa8J3QNX5 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shisa8J3QNX5 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Shisa8J3QNX5 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shisa8J3QNX5 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shisa8J3QNX5 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shisa8J3QNX5 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shisa8J3QNX5 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shisa8J3QNX5 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shisa8J3QNX5 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.83□□□□□ -0.2
Shisa8J3QNX5 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shisa8J3QNX5 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shisa8J3QNX5 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shisa8J3QNX5 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Gm6345-202ENSMUST00000180900 204 ntBASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Gm10252-201ENSMUST00000209541 832 ntBASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa8J3QNX5 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.81□□□□□ -0.2
Shisa8J3QNX5 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Gm8825-201ENSMUST00000182565 998 ntBASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Gm4518-201ENSMUST00000182638 718 ntBASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa8J3QNX5 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa8J3QNX5 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms