Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sgo2bJ3QMK1 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sgo2bJ3QMK1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Sgo2bJ3QMK1 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sgo2bJ3QMK1 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.12■□□□□ 0.01
Sgo2bJ3QMK1 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.12■□□□□ 0.01
Sgo2bJ3QMK1 Gm5682-201ENSMUST00000173402 505 ntBASIC15.12■□□□□ 0.01
Sgo2bJ3QMK1 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Sgo2bJ3QMK1 Rps4l-201ENSMUST00000071745 943 ntBASIC15.12■□□□□ 0.01
Sgo2bJ3QMK1 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sgo2bJ3QMK1 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sgo2bJ3QMK1 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sgo2bJ3QMK1 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sgo2bJ3QMK1 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.12■□□□□ 0.01
Sgo2bJ3QMK1 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sgo2bJ3QMK1 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sgo2bJ3QMK1 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Sgo2bJ3QMK1 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sgo2bJ3QMK1 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sgo2bJ3QMK1 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sgo2bJ3QMK1 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sgo2bJ3QMK1 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.11■□□□□ 0.01
Sgo2bJ3QMK1 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sgo2bJ3QMK1 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Sgo2bJ3QMK1 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sgo2bJ3QMK1 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sgo2bJ3QMK1 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sgo2bJ3QMK1 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.11■□□□□ 0.01
Sgo2bJ3QMK1 Gm10499-201ENSMUST00000174094 934 ntBASIC15.11■□□□□ 0.01
Sgo2bJ3QMK1 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.11■□□□□ 0.01
Sgo2bJ3QMK1 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.11■□□□□ 0.01
Sgo2bJ3QMK1 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.11■□□□□ 0.01
Sgo2bJ3QMK1 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sgo2bJ3QMK1 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.11■□□□□ 0.01
Sgo2bJ3QMK1 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sgo2bJ3QMK1 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sgo2bJ3QMK1 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sgo2bJ3QMK1 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sgo2bJ3QMK1 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sgo2bJ3QMK1 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sgo2bJ3QMK1 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sgo2bJ3QMK1 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sgo2bJ3QMK1 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sgo2bJ3QMK1 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sgo2bJ3QMK1 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.11■□□□□ 0.01
Sgo2bJ3QMK1 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sgo2bJ3QMK1 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.1■□□□□ 0.01
Sgo2bJ3QMK1 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sgo2bJ3QMK1 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sgo2bJ3QMK1 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sgo2bJ3QMK1 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sgo2bJ3QMK1 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sgo2bJ3QMK1 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sgo2bJ3QMK1 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sgo2bJ3QMK1 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sgo2bJ3QMK1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sgo2bJ3QMK1 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sgo2bJ3QMK1 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sgo2bJ3QMK1 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.1■□□□□ 0.01
Sgo2bJ3QMK1 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sgo2bJ3QMK1 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sgo2bJ3QMK1 Celf4-206ENSMUST00000224553 1729 ntBASIC15.1■□□□□ 0.01
Sgo2bJ3QMK1 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Sgo2bJ3QMK1 Gm18489-201ENSMUST00000172565 551 ntBASIC15.1■□□□□ 0.01
Sgo2bJ3QMK1 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sgo2bJ3QMK1 Gm6376-201ENSMUST00000209407 580 ntBASIC15.1■□□□□ 0.01
Sgo2bJ3QMK1 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.1■□□□□ 0.01
Sgo2bJ3QMK1 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sgo2bJ3QMK1 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sgo2bJ3QMK1 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sgo2bJ3QMK1 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sgo2bJ3QMK1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sgo2bJ3QMK1 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sgo2bJ3QMK1 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sgo2bJ3QMK1 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sgo2bJ3QMK1 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sgo2bJ3QMK1 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sgo2bJ3QMK1 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sgo2bJ3QMK1 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sgo2bJ3QMK1 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sgo2bJ3QMK1 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sgo2bJ3QMK1 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sgo2bJ3QMK1 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.09■□□□□ 0.01
Sgo2bJ3QMK1 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Sgo2bJ3QMK1 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.09■□□□□ 0.01
Sgo2bJ3QMK1 Gm37153-201ENSMUST00000193637 231 ntBASIC15.09■□□□□ 0.01
Sgo2bJ3QMK1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sgo2bJ3QMK1 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sgo2bJ3QMK1 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sgo2bJ3QMK1 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Sgo2bJ3QMK1 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Sgo2bJ3QMK1 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.09■□□□□ 0.01
Sgo2bJ3QMK1 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms