Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NpcdF8VQB8 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
NpcdF8VQB8 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NpcdF8VQB8 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NpcdF8VQB8 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NpcdF8VQB8 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NpcdF8VQB8 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC18.18■□□□□ 0.5
NpcdF8VQB8 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NpcdF8VQB8 Gm8318-201ENSMUST00000182954 872 ntBASIC18.18■□□□□ 0.5
NpcdF8VQB8 Gm6745-201ENSMUST00000199216 526 ntBASIC18.18■□□□□ 0.5
NpcdF8VQB8 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NpcdF8VQB8 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NpcdF8VQB8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NpcdF8VQB8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
NpcdF8VQB8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NpcdF8VQB8 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NpcdF8VQB8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NpcdF8VQB8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NpcdF8VQB8 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NpcdF8VQB8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
NpcdF8VQB8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NpcdF8VQB8 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NpcdF8VQB8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NpcdF8VQB8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NpcdF8VQB8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NpcdF8VQB8 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
NpcdF8VQB8 Gm13015-201ENSMUST00000118674 204 ntBASIC18.17■□□□□ 0.5
NpcdF8VQB8 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC18.17■□□□□ 0.5
NpcdF8VQB8 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NpcdF8VQB8 Gm44344-201ENSMUST00000200287 129 ntBASIC18.17■□□□□ 0.5
NpcdF8VQB8 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC18.17■□□□□ 0.5
NpcdF8VQB8 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC18.17■□□□□ 0.5
NpcdF8VQB8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.17■□□□□ 0.5
NpcdF8VQB8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NpcdF8VQB8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NpcdF8VQB8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NpcdF8VQB8 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
NpcdF8VQB8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NpcdF8VQB8 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NpcdF8VQB8 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
NpcdF8VQB8 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NpcdF8VQB8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NpcdF8VQB8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NpcdF8VQB8 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NpcdF8VQB8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
NpcdF8VQB8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NpcdF8VQB8 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NpcdF8VQB8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NpcdF8VQB8 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NpcdF8VQB8 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NpcdF8VQB8 Gm16026-204ENSMUST00000162652 683 ntBASIC18.16■□□□□ 0.5
NpcdF8VQB8 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NpcdF8VQB8 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC18.16■□□□□ 0.5
NpcdF8VQB8 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NpcdF8VQB8 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NpcdF8VQB8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
NpcdF8VQB8 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
NpcdF8VQB8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
NpcdF8VQB8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.16■□□□□ 0.5
NpcdF8VQB8 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NpcdF8VQB8 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
NpcdF8VQB8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
NpcdF8VQB8 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NpcdF8VQB8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NpcdF8VQB8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
NpcdF8VQB8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NpcdF8VQB8 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NpcdF8VQB8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
NpcdF8VQB8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NpcdF8VQB8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
NpcdF8VQB8 Gm6539-201ENSMUST00000119157 1064 ntBASIC18.15■□□□□ 0.5
NpcdF8VQB8 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NpcdF8VQB8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NpcdF8VQB8 Gm6473-201ENSMUST00000188572 1210 ntBASIC18.15■□□□□ 0.5
NpcdF8VQB8 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NpcdF8VQB8 Gm6180-201ENSMUST00000065243 498 ntBASIC18.15■□□□□ 0.5
NpcdF8VQB8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.15■□□□□ 0.5
NpcdF8VQB8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NpcdF8VQB8 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NpcdF8VQB8 Grk6-207ENSMUST00000225925 2769 ntBASIC18.15■□□□□ 0.5
NpcdF8VQB8 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NpcdF8VQB8 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NpcdF8VQB8 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
NpcdF8VQB8 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NpcdF8VQB8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
NpcdF8VQB8 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
NpcdF8VQB8 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NpcdF8VQB8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NpcdF8VQB8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NpcdF8VQB8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
NpcdF8VQB8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NpcdF8VQB8 Gm13829-201ENSMUST00000119600 138 ntBASIC18.14■□□□□ 0.49
NpcdF8VQB8 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC18.14■□□□□ 0.49
NpcdF8VQB8 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NpcdF8VQB8 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NpcdF8VQB8 Gm27533-201ENSMUST00000183800 152 ntBASIC18.14■□□□□ 0.49
NpcdF8VQB8 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NpcdF8VQB8 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC18.14■□□□□ 0.49
NpcdF8VQB8 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC18.14■□□□□ 0.49
NpcdF8VQB8 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms