Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Gm9103-201ENSMUST00000119371 405 ntBASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Gm28033-201ENSMUST00000184224 96 ntBASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.22■□□□□ 0.03
Gm28043E0CXC2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Gm28043E0CXC2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm28043E0CXC2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm28043E0CXC2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Gm28043E0CXC2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Gm28043E0CXC2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm28043E0CXC2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm28043E0CXC2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.21■□□□□ 0.03
Gm28043E0CXC2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.21■□□□□ 0.03
Gm28043E0CXC2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Gm28043E0CXC2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm28043E0CXC2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm28043E0CXC2 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm28043E0CXC2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm28043E0CXC2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm28043E0CXC2 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
Gm28043E0CXC2 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Gm28043E0CXC2 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Gm28043E0CXC2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Gm28043E0CXC2 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Gm28043E0CXC2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.21■□□□□ 0.02
Gm28043E0CXC2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Gm28043E0CXC2 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Gm28043E0CXC2 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Gm9172-201ENSMUST00000212092 954 ntBASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms