Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hfm1D3Z4R1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21■□□□□ 0.95
Hfm1D3Z4R1 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Hfm1D3Z4R1 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Hfm1D3Z4R1 Gm15824-201ENSMUST00000119516 955 ntBASIC20.99■□□□□ 0.95
Hfm1D3Z4R1 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Hfm1D3Z4R1 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC20.99■□□□□ 0.95
Hfm1D3Z4R1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hfm1D3Z4R1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.99■□□□□ 0.95
Hfm1D3Z4R1 AC155286.1-201ENSMUST00000218632 448 ntBASIC20.99■□□□□ 0.95
Hfm1D3Z4R1 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC20.99■□□□□ 0.95
Hfm1D3Z4R1 Mir125a-201ENSMUST00000083545 68 ntBASIC20.99■□□□□ 0.95
Hfm1D3Z4R1 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Hfm1D3Z4R1 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hfm1D3Z4R1 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hfm1D3Z4R1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Hfm1D3Z4R1 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Hfm1D3Z4R1 AC153526.5-201ENSMUST00000218661 2147 ntBASIC20.99■□□□□ 0.95
Hfm1D3Z4R1 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hfm1D3Z4R1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
Hfm1D3Z4R1 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC20.98■□□□□ 0.95
Hfm1D3Z4R1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hfm1D3Z4R1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hfm1D3Z4R1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Hfm1D3Z4R1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hfm1D3Z4R1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hfm1D3Z4R1 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hfm1D3Z4R1 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hfm1D3Z4R1 Gm15678-201ENSMUST00000117573 960 ntBASIC20.98■□□□□ 0.95
Hfm1D3Z4R1 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hfm1D3Z4R1 Gm19220-201ENSMUST00000222682 803 ntBASIC20.98■□□□□ 0.95
Hfm1D3Z4R1 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hfm1D3Z4R1 Mxra8os-201ENSMUST00000097740 687 ntBASIC20.98■□□□□ 0.95
Hfm1D3Z4R1 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hfm1D3Z4R1 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hfm1D3Z4R1 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hfm1D3Z4R1 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hfm1D3Z4R1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hfm1D3Z4R1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hfm1D3Z4R1 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hfm1D3Z4R1 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hfm1D3Z4R1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hfm1D3Z4R1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hfm1D3Z4R1 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hfm1D3Z4R1 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hfm1D3Z4R1 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hfm1D3Z4R1 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hfm1D3Z4R1 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC20.97■□□□□ 0.95
Hfm1D3Z4R1 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC20.97■□□□□ 0.95
Hfm1D3Z4R1 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hfm1D3Z4R1 Gm37230-201ENSMUST00000194491 818 ntBASIC20.97■□□□□ 0.95
Hfm1D3Z4R1 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC20.97■□□□□ 0.95
Hfm1D3Z4R1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hfm1D3Z4R1 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hfm1D3Z4R1 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hfm1D3Z4R1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Hfm1D3Z4R1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC20.97■□□□□ 0.95
Hfm1D3Z4R1 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hfm1D3Z4R1 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Hfm1D3Z4R1 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hfm1D3Z4R1 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hfm1D3Z4R1 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hfm1D3Z4R1 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hfm1D3Z4R1 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Hfm1D3Z4R1 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hfm1D3Z4R1 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hfm1D3Z4R1 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC20.96■□□□□ 0.95
Hfm1D3Z4R1 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hfm1D3Z4R1 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hfm1D3Z4R1 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hfm1D3Z4R1 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hfm1D3Z4R1 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hfm1D3Z4R1 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Hfm1D3Z4R1 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hfm1D3Z4R1 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Hfm1D3Z4R1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hfm1D3Z4R1 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
Hfm1D3Z4R1 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Hfm1D3Z4R1 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hfm1D3Z4R1 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Hfm1D3Z4R1 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Hfm1D3Z4R1 Gm9002-201ENSMUST00000178437 499 ntBASIC20.95■□□□□ 0.95
Hfm1D3Z4R1 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC20.95■□□□□ 0.95
Hfm1D3Z4R1 AC154687.2-201ENSMUST00000223853 640 ntBASIC20.95■□□□□ 0.95
Hfm1D3Z4R1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.95■□□□□ 0.95
Hfm1D3Z4R1 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hfm1D3Z4R1 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hfm1D3Z4R1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hfm1D3Z4R1 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hfm1D3Z4R1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hfm1D3Z4R1 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hfm1D3Z4R1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.95■□□□□ 0.94
Hfm1D3Z4R1 Gm12960-201ENSMUST00000120017 1066 ntBASIC20.95■□□□□ 0.94
Hfm1D3Z4R1 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hfm1D3Z4R1 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC20.95■□□□□ 0.94
Hfm1D3Z4R1 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hfm1D3Z4R1 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hfm1D3Z4R1 Mir6392-201ENSMUST00000184924 108 ntBASIC20.95■□□□□ 0.94
Hfm1D3Z4R1 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC20.95■□□□□ 0.94
Hfm1D3Z4R1 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms