Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syce3B5KM66 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.35■□□□□ 0.37
Syce3B5KM66 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Syce3B5KM66 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.35■□□□□ 0.37
Syce3B5KM66 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.35■□□□□ 0.37
Syce3B5KM66 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.35■□□□□ 0.37
Syce3B5KM66 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syce3B5KM66 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syce3B5KM66 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syce3B5KM66 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Syce3B5KM66 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syce3B5KM66 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syce3B5KM66 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
Syce3B5KM66 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Syce3B5KM66 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.35■□□□□ 0.37
Syce3B5KM66 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syce3B5KM66 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syce3B5KM66 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syce3B5KM66 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syce3B5KM66 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.35■□□□□ 0.37
Syce3B5KM66 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syce3B5KM66 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Syce3B5KM66 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syce3B5KM66 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Syce3B5KM66 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syce3B5KM66 Gm14722-201ENSMUST00000118943 689 ntBASIC17.34■□□□□ 0.37
Syce3B5KM66 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Syce3B5KM66 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.34■□□□□ 0.37
Syce3B5KM66 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.34■□□□□ 0.37
Syce3B5KM66 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Syce3B5KM66 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC17.34■□□□□ 0.37
Syce3B5KM66 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Syce3B5KM66 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.34■□□□□ 0.37
Syce3B5KM66 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syce3B5KM66 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syce3B5KM66 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syce3B5KM66 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syce3B5KM66 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syce3B5KM66 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syce3B5KM66 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syce3B5KM66 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Syce3B5KM66 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syce3B5KM66 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Syce3B5KM66 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Syce3B5KM66 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Syce3B5KM66 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Syce3B5KM66 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Syce3B5KM66 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syce3B5KM66 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syce3B5KM66 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syce3B5KM66 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Syce3B5KM66 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syce3B5KM66 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syce3B5KM66 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Syce3B5KM66 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.33■□□□□ 0.36
Syce3B5KM66 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Syce3B5KM66 Gm18101-201ENSMUST00000215769 548 ntBASIC17.33■□□□□ 0.36
Syce3B5KM66 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.33■□□□□ 0.36
Syce3B5KM66 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.33■□□□□ 0.36
Syce3B5KM66 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.33■□□□□ 0.36
Syce3B5KM66 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.33■□□□□ 0.36
Syce3B5KM66 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Syce3B5KM66 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syce3B5KM66 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syce3B5KM66 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syce3B5KM66 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syce3B5KM66 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syce3B5KM66 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syce3B5KM66 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syce3B5KM66 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syce3B5KM66 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syce3B5KM66 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Syce3B5KM66 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Syce3B5KM66 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Syce3B5KM66 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.32■□□□□ 0.36
Syce3B5KM66 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Syce3B5KM66 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Syce3B5KM66 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Syce3B5KM66 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Syce3B5KM66 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Syce3B5KM66 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Syce3B5KM66 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Syce3B5KM66 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.32■□□□□ 0.36
Syce3B5KM66 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.32■□□□□ 0.36
Syce3B5KM66 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.32■□□□□ 0.36
Syce3B5KM66 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Syce3B5KM66 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Syce3B5KM66 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Syce3B5KM66 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Syce3B5KM66 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Syce3B5KM66 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Syce3B5KM66 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.32■□□□□ 0.36
Syce3B5KM66 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.31■□□□□ 0.36
Syce3B5KM66 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syce3B5KM66 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syce3B5KM66 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syce3B5KM66 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syce3B5KM66 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syce3B5KM66 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Syce3B5KM66 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms