Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a5A6H584 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a5A6H584 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a5A6H584 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Col6a5A6H584 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.59
Col6a5A6H584 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.33□□□□□ -0.6
Col6a5A6H584 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a5A6H584 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a5A6H584 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a5A6H584 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a5A6H584 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC11.33□□□□□ -0.6
Col6a5A6H584 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Col6a5A6H584 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Col6a5A6H584 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Col6a5A6H584 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a5A6H584 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a5A6H584 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a5A6H584 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.33□□□□□ -0.6
Col6a5A6H584 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a5A6H584 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a5A6H584 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Col6a5A6H584 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a5A6H584 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a5A6H584 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a5A6H584 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a5A6H584 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Col6a5A6H584 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Col6a5A6H584 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a5A6H584 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Col6a5A6H584 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Col6a5A6H584 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC11.33□□□□□ -0.6
Col6a5A6H584 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC11.33□□□□□ -0.6
Col6a5A6H584 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a5A6H584 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a5A6H584 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a5A6H584 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a5A6H584 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a5A6H584 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Col6a5A6H584 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.32□□□□□ -0.6
Col6a5A6H584 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm29310-201ENSMUST00000185468 696 ntBASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm21825-201ENSMUST00000185728 696 ntBASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm29109-201ENSMUST00000185895 696 ntBASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm21896-201ENSMUST00000186520 696 ntBASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm21873-201ENSMUST00000186728 696 ntBASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm21794-201ENSMUST00000187056 696 ntBASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm21880-201ENSMUST00000187275 696 ntBASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm21826-201ENSMUST00000187451 696 ntBASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm21198-201ENSMUST00000188393 696 ntBASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm21749-201ENSMUST00000189343 696 ntBASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm21901-201ENSMUST00000189568 696 ntBASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm29424-201ENSMUST00000189716 696 ntBASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm28599-201ENSMUST00000189838 694 ntBASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm21867-201ENSMUST00000189917 696 ntBASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm29269-201ENSMUST00000190087 696 ntBASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm21722-201ENSMUST00000190153 696 ntBASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm28423-201ENSMUST00000190701 696 ntBASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm21899-201ENSMUST00000190745 696 ntBASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm21910-201ENSMUST00000191163 696 ntBASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm21849-201ENSMUST00000191571 696 ntBASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm28678-201ENSMUST00000191593 696 ntBASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm20910-201ENSMUST00000193268 696 ntBASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm37259-201ENSMUST00000193903 849 ntBASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm21871-201ENSMUST00000194621 696 ntBASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm9229-201ENSMUST00000222777 126 ntBASIC11.32□□□□□ -0.6
Col6a5A6H584 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a5A6H584 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a5A6H584 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a5A6H584 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a5A6H584 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a5A6H584 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a5A6H584 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Col6a5A6H584 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a5A6H584 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Col6a5A6H584 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a5A6H584 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a5A6H584 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a5A6H584 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Col6a5A6H584 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a5A6H584 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.32□□□□□ -0.6
Col6a5A6H584 Mir7032-201ENSMUST00000185154 79 ntBASIC11.32□□□□□ -0.6
Col6a5A6H584 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.32□□□□□ -0.6
Col6a5A6H584 Gm7399-201ENSMUST00000032395 858 ntBASIC11.32□□□□□ -0.6
Col6a5A6H584 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a5A6H584 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.32□□□□□ -0.6
Col6a5A6H584 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a5A6H584 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a5A6H584 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a5A6H584 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a5A6H584 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Col6a5A6H584 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.31□□□□□ -0.6
Col6a5A6H584 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a5A6H584 Gm5370-201ENSMUST00000187187 574 ntBASIC11.31□□□□□ -0.6
Col6a5A6H584 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.31□□□□□ -0.6
Col6a5A6H584 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms