Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn3aA2ASI5 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn3aA2ASI5 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Scn3aA2ASI5 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn3aA2ASI5 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scn3aA2ASI5 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scn3aA2ASI5 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scn3aA2ASI5 Gm6539-201ENSMUST00000119157 1064 ntBASIC16.78■□□□□ 0.28
Scn3aA2ASI5 Gm14057-201ENSMUST00000120631 482 ntBASIC16.78■□□□□ 0.28
Scn3aA2ASI5 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.78■□□□□ 0.28
Scn3aA2ASI5 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Scn3aA2ASI5 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.78■□□□□ 0.28
Scn3aA2ASI5 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Scn3aA2ASI5 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn3aA2ASI5 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.78■□□□□ 0.28
Scn3aA2ASI5 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn3aA2ASI5 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn3aA2ASI5 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16.78■□□□□ 0.28
Scn3aA2ASI5 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn3aA2ASI5 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn3aA2ASI5 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn3aA2ASI5 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Scn3aA2ASI5 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn3aA2ASI5 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn3aA2ASI5 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.77■□□□□ 0.28
Scn3aA2ASI5 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn3aA2ASI5 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn3aA2ASI5 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Scn3aA2ASI5 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn3aA2ASI5 Gm8410-201ENSMUST00000117225 605 ntBASIC16.77■□□□□ 0.28
Scn3aA2ASI5 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Scn3aA2ASI5 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.77■□□□□ 0.28
Scn3aA2ASI5 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn3aA2ASI5 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Scn3aA2ASI5 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Scn3aA2ASI5 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Scn3aA2ASI5 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.77■□□□□ 0.27
Scn3aA2ASI5 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.27
Scn3aA2ASI5 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.77■□□□□ 0.27
Scn3aA2ASI5 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scn3aA2ASI5 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.77■□□□□ 0.27
Scn3aA2ASI5 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.77■□□□□ 0.27
Scn3aA2ASI5 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scn3aA2ASI5 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn3aA2ASI5 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.76■□□□□ 0.27
Scn3aA2ASI5 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.76■□□□□ 0.27
Scn3aA2ASI5 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scn3aA2ASI5 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.76■□□□□ 0.27
Scn3aA2ASI5 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn3aA2ASI5 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.76■□□□□ 0.27
Scn3aA2ASI5 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn3aA2ASI5 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Scn3aA2ASI5 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn3aA2ASI5 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scn3aA2ASI5 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn3aA2ASI5 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn3aA2ASI5 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.76■□□□□ 0.27
Scn3aA2ASI5 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scn3aA2ASI5 Gm9719-201ENSMUST00000162765 543 ntBASIC16.76■□□□□ 0.27
Scn3aA2ASI5 Gm27306-201ENSMUST00000183970 107 ntBASIC16.76■□□□□ 0.27
Scn3aA2ASI5 Gm45098-201ENSMUST00000207179 657 ntBASIC16.76■□□□□ 0.27
Scn3aA2ASI5 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Scn3aA2ASI5 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn3aA2ASI5 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3aA2ASI5 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3aA2ASI5 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3aA2ASI5 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Scn3aA2ASI5 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3aA2ASI5 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.75■□□□□ 0.27
Scn3aA2ASI5 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Scn3aA2ASI5 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3aA2ASI5 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3aA2ASI5 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.75■□□□□ 0.27
Scn3aA2ASI5 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3aA2ASI5 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3aA2ASI5 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.75■□□□□ 0.27
Scn3aA2ASI5 Gm23547-201ENSMUST00000158210 271 ntBASIC16.75■□□□□ 0.27
Scn3aA2ASI5 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3aA2ASI5 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3aA2ASI5 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3aA2ASI5 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3aA2ASI5 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Scn3aA2ASI5 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3aA2ASI5 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3aA2ASI5 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3aA2ASI5 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3aA2ASI5 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.75■□□□□ 0.27
Scn3aA2ASI5 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3aA2ASI5 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3aA2ASI5 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3aA2ASI5 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.75■□□□□ 0.27
Scn3aA2ASI5 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3aA2ASI5 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Scn3aA2ASI5 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Scn3aA2ASI5 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Scn3aA2ASI5 Gm24543-201ENSMUST00000103867 82 ntBASIC16.74■□□□□ 0.27
Scn3aA2ASI5 Gm27533-201ENSMUST00000183800 152 ntBASIC16.74■□□□□ 0.27
Scn3aA2ASI5 Gm18766-201ENSMUST00000189811 808 ntBASIC16.74■□□□□ 0.27
Scn3aA2ASI5 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn3aA2ASI5 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms