Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-1A0N8R0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Gm12497-201ENSMUST00000138778 237 ntBASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-1A0N8R0 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12d-1A0N8R0 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-1A0N8R0 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms