Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc112A0AUP1 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc112A0AUP1 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc112A0AUP1 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc112A0AUP1 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc112A0AUP1 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc112A0AUP1 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc112A0AUP1 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc112A0AUP1 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc112A0AUP1 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.32■□□□□ 0.36
Ccdc112A0AUP1 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc112A0AUP1 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc112A0AUP1 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc112A0AUP1 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc112A0AUP1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.32■□□□□ 0.36
Ccdc112A0AUP1 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc112A0AUP1 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc112A0AUP1 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ccdc112A0AUP1 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc112A0AUP1 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Gm12644-201ENSMUST00000119935 606 ntBASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc112A0AUP1 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc112A0AUP1 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ccdc112A0AUP1 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc112A0AUP1 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc112A0AUP1 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc112A0AUP1 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc112A0AUP1 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc112A0AUP1 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc112A0AUP1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc112A0AUP1 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Ccdc112A0AUP1 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.3■□□□□ 0.36
Ccdc112A0AUP1 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc112A0AUP1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc112A0AUP1 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc112A0AUP1 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Ccdc112A0AUP1 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc112A0AUP1 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc112A0AUP1 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc112A0AUP1 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc112A0AUP1 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc112A0AUP1 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc112A0AUP1 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ccdc112A0AUP1 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ccdc112A0AUP1 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ccdc112A0AUP1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ccdc112A0AUP1 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc112A0AUP1 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc112A0AUP1 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc112A0AUP1 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.29■□□□□ 0.36
Ccdc112A0AUP1 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc112A0AUP1 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc112A0AUP1 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc112A0AUP1 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc112A0AUP1 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.29■□□□□ 0.36
Ccdc112A0AUP1 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ccdc112A0AUP1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc112A0AUP1 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.29■□□□□ 0.36
Ccdc112A0AUP1 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc112A0AUP1 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Ccdc112A0AUP1 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc112A0AUP1 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc112A0AUP1 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc112A0AUP1 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc112A0AUP1 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Ccdc112A0AUP1 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms