Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smim17A0A504 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smim17A0A504 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smim17A0A504 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smim17A0A504 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smim17A0A504 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smim17A0A504 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smim17A0A504 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smim17A0A504 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smim17A0A504 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smim17A0A504 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smim17A0A504 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smim17A0A504 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Smim17A0A504 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Smim17A0A504 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Smim17A0A504 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Smim17A0A504 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Smim17A0A504 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim17A0A504 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim17A0A504 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Smim17A0A504 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim17A0A504 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Smim17A0A504 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim17A0A504 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim17A0A504 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim17A0A504 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim17A0A504 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim17A0A504 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Smim17A0A504 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim17A0A504 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smim17A0A504 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smim17A0A504 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim17A0A504 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim17A0A504 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim17A0A504 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Smim17A0A504 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim17A0A504 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smim17A0A504 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim17A0A504 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim17A0A504 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim17A0A504 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim17A0A504 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim17A0A504 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smim17A0A504 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.75□□□□□ -0.21
Smim17A0A504 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim17A0A504 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.75□□□□□ -0.21
Smim17A0A504 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim17A0A504 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim17A0A504 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.74□□□□□ -0.21
Smim17A0A504 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Smim17A0A504 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Smim17A0A504 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smim17A0A504 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim17A0A504 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Smim17A0A504 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim17A0A504 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim17A0A504 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim17A0A504 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim17A0A504 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Smim17A0A504 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smim17A0A504 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim17A0A504 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Smim17A0A504 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms