Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.99■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.98■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.98■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Gm2272-201ENSMUST00000194903 582 ntBASIC15.98■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.98■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.98■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.98■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.98■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.97■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.97■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.97■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.97■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Gm37935-201ENSMUST00000192012 982 ntBASIC15.97■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.97■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.97■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.96■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.96■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Gm4995-201ENSMUST00000117247 432 ntBASIC15.96■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Mindy4b-psA0A1W2P7H6 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Mindy4b-psA0A1W2P7H6 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Mindy4b-psA0A1W2P7H6 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Mindy4b-psA0A1W2P7H6 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Mindy4b-psA0A1W2P7H6 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.95■□□□□ 0.14
Mindy4b-psA0A1W2P7H6 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Mindy4b-psA0A1W2P7H6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.95■□□□□ 0.14
Mindy4b-psA0A1W2P7H6 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Mindy4b-psA0A1W2P7H6 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Mindy4b-psA0A1W2P7H6 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Mindy4b-psA0A1W2P7H6 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Mindy4b-psA0A1W2P7H6 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Mindy4b-psA0A1W2P7H6 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Mindy4b-psA0A1W2P7H6 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Mindy4b-psA0A1W2P7H6 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.95■□□□□ 0.14
Mindy4b-psA0A1W2P7H6 Gm16198-201ENSMUST00000118766 670 ntBASIC15.95■□□□□ 0.14
Mindy4b-psA0A1W2P7H6 Gm25911-201ENSMUST00000157621 56 ntBASIC15.95■□□□□ 0.14
Mindy4b-psA0A1W2P7H6 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.95■□□□□ 0.14
Mindy4b-psA0A1W2P7H6 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.95■□□□□ 0.14
Mindy4b-psA0A1W2P7H6 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.95■□□□□ 0.14
Mindy4b-psA0A1W2P7H6 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.95■□□□□ 0.14
Mindy4b-psA0A1W2P7H6 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Mindy4b-psA0A1W2P7H6 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Mindy4b-psA0A1W2P7H6 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Mindy4b-psA0A1W2P7H6 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Mindy4b-psA0A1W2P7H6 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Mindy4b-psA0A1W2P7H6 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms