Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lnp1A0A1B0GSK3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Lnp1A0A1B0GSK3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lnp1A0A1B0GSK3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Gm7230-201ENSMUST00000173026 815 ntBASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lnp1A0A1B0GSK3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Gm28659-201ENSMUST00000188013 759 ntBASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lnp1A0A1B0GSK3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lnp1A0A1B0GSK3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lnp1A0A1B0GSK3 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lnp1A0A1B0GSK3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lnp1A0A1B0GSK3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lnp1A0A1B0GSK3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lnp1A0A1B0GSK3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Lnp1A0A1B0GSK3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lnp1A0A1B0GSK3 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lnp1A0A1B0GSK3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lnp1A0A1B0GSK3 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lnp1A0A1B0GSK3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lnp1A0A1B0GSK3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lnp1A0A1B0GSK3 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lnp1A0A1B0GSK3 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lnp1A0A1B0GSK3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lnp1A0A1B0GSK3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Lnp1A0A1B0GSK3 Gm10499-201ENSMUST00000174094 934 ntBASIC12.59□□□□□ -0.39
Lnp1A0A1B0GSK3 Gm6550-201ENSMUST00000187574 993 ntBASIC12.59□□□□□ -0.39
Lnp1A0A1B0GSK3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.59□□□□□ -0.39
Lnp1A0A1B0GSK3 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lnp1A0A1B0GSK3 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.59□□□□□ -0.39
Lnp1A0A1B0GSK3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms