Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gm27628-201ENSMUST00000184911 107 ntBASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 AC093926.2-201ENSMUST00000214468 1228 ntBASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Wnt10b-206ENSMUST00000228546 2709 ntBASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gm37812-201ENSMUST00000195216 2475 ntBASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gm11594-201ENSMUST00000122313 162 ntBASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gm37153-201ENSMUST00000193637 231 ntBASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 AC132104.2-201ENSMUST00000215011 266 ntBASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 AC159106.1-201ENSMUST00000224421 690 ntBASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 AC159093.1-201ENSMUST00000227779 380 ntBASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gm38058-201ENSMUST00000194323 4368 ntBASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gm15467-201ENSMUST00000120582 445 ntBASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gm5867-201ENSMUST00000063197 592 ntBASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms