Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gm44350-201ENSMUST00000197197 138 ntBASIC11.04□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Gm44390-201ENSMUST00000197533 144 ntBASIC11.04□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Gm44313-201ENSMUST00000198018 138 ntBASIC11.04□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Gm44486-201ENSMUST00000198508 138 ntBASIC11.04□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Gm44314-201ENSMUST00000199263 138 ntBASIC11.04□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Gm44394-201ENSMUST00000199558 138 ntBASIC11.04□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Gm44484-201ENSMUST00000199873 138 ntBASIC11.04□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Gm44466-201ENSMUST00000200264 138 ntBASIC11.04□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Gm44359-201ENSMUST00000200671 138 ntBASIC11.04□□□□□ -0.64
Trav9n-2A0A0G2JDP3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Gm6296-201ENSMUST00000222599 943 ntBASIC11.04□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Birc2-201ENSMUST00000054878 378 ntBASIC11.04□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.04□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9n-2A0A0G2JDP3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC11.04□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Gm11780-201ENSMUST00000136880 516 ntBASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Gm11839-201ENSMUST00000120647 1953 ntBASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.02□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav9n-2A0A0G2JDP3 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.02□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.02□□□□□ -0.65
Trav9n-2A0A0G2JDP3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC11.02□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC11.02□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.02□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.02□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-2A0A0G2JDP3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms