Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Pcdh7A0A0A6YY83 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.58■□□□□ 0.08
Pcdh7A0A0A6YY83 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdh7A0A0A6YY83 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.58■□□□□ 0.08
Pcdh7A0A0A6YY83 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh7A0A0A6YY83 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh7A0A0A6YY83 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh7A0A0A6YY83 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh7A0A0A6YY83 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.58■□□□□ 0.08
Pcdh7A0A0A6YY83 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
Pcdh7A0A0A6YY83 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh7A0A0A6YY83 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh7A0A0A6YY83 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Pcdh7A0A0A6YY83 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh7A0A0A6YY83 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Pcdh7A0A0A6YY83 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh7A0A0A6YY83 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Gm12008-201ENSMUST00000117791 755 ntBASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Gm14140-201ENSMUST00000119999 995 ntBASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Sybu-209ENSMUST00000228639 4113 ntBASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh7A0A0A6YY83 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Pcdh7A0A0A6YY83 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh7A0A0A6YY83 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh7A0A0A6YY83 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh7A0A0A6YY83 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh7A0A0A6YY83 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Pcdh7A0A0A6YY83 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh7A0A0A6YY83 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh7A0A0A6YY83 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Pcdh7A0A0A6YY83 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh7A0A0A6YY83 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Pcdh7A0A0A6YY83 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh7A0A0A6YY83 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh7A0A0A6YY83 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.55■□□□□ 0.08
Pcdh7A0A0A6YY83 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.55■□□□□ 0.08
Pcdh7A0A0A6YY83 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms