Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm7889-201ENSMUST00000185591 958 ntBASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm9172-201ENSMUST00000212092 954 ntBASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm37055-201ENSMUST00000191866 133 ntBASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6d-5A0A075B6B9 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6d-5A0A075B6B9 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms