Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-7A0A075B6B0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Gm18733-201ENSMUST00000173950 856 ntBASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Gm6376-201ENSMUST00000209407 580 ntBASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 CT009713.7-201ENSMUST00000224689 571 ntBASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-7A0A075B6B0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-7A0A075B6B0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-7A0A075B6B0 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-7A0A075B6B0 Gm9889-202ENSMUST00000206983 1577 ntBASIC11.71□□□□□ -0.53
Trav6d-7A0A075B6B0 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-7A0A075B6B0 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav6d-7A0A075B6B0 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-7A0A075B6B0 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.71□□□□□ -0.53
Trav6d-7A0A075B6B0 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-7A0A075B6B0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-7A0A075B6B0 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-7A0A075B6B0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-7A0A075B6B0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-7A0A075B6B0 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-7A0A075B6B0 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-7A0A075B6B0 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-7A0A075B6B0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-7A0A075B6B0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-7A0A075B6B0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Trav6d-7A0A075B6B0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav6d-7A0A075B6B0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav6d-7A0A075B6B0 Gm25745-201ENSMUST00000174945 133 ntBASIC11.71□□□□□ -0.53
Trav6d-7A0A075B6B0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC11.71□□□□□ -0.53
Trav6d-7A0A075B6B0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-7A0A075B6B0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-7A0A075B6B0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav6d-7A0A075B6B0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Trav6d-7A0A075B6B0 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6d-7A0A075B6B0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC11.71□□□□□ -0.54
Trav6d-7A0A075B6B0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms