Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Gm32996-201ENSMUST00000199828 1447 ntBASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-4A0A075B654 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Gm18025-201ENSMUST00000221733 862 ntBASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Gm11839-201ENSMUST00000120647 1953 ntBASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC10.23□□□□□ -0.77
Trav3-4A0A075B654 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Gm45504-201ENSMUST00000211407 2107 ntBASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-4A0A075B654 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms