Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm6433-201ENSMUST00000118634 875 ntBASIC12.41□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm13312-201ENSMUST00000119631 718 ntBASIC12.41□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.41□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.41□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm6345-202ENSMUST00000180900 204 ntBASIC12.4□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.4□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.4□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Gm5587-201ENSMUST00000206270 674 ntBASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Gm19164-201ENSMUST00000210667 640 ntBASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms