Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Gm12895-201ENSMUST00000122214 226 ntBASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Gm27357-201ENSMUST00000183754 135 ntBASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-1A0A075B601 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Gm14722-201ENSMUST00000118943 689 ntBASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Gm12644-201ENSMUST00000119935 606 ntBASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-1A0A075B601 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav9-1A0A075B601 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9-1A0A075B601 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9-1A0A075B601 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9-1A0A075B601 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9-1A0A075B601 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9-1A0A075B601 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9-1A0A075B601 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9-1A0A075B601 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9-1A0A075B601 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9-1A0A075B601 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav9-1A0A075B601 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav9-1A0A075B601 Gm8097-201ENSMUST00000117903 829 ntBASIC11.83□□□□□ -0.52
Trav9-1A0A075B601 Gm15372-201ENSMUST00000120729 834 ntBASIC11.83□□□□□ -0.52
Trav9-1A0A075B601 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Trav9-1A0A075B601 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav9-1A0A075B601 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9-1A0A075B601 AC122024.2-201ENSMUST00000220086 871 ntBASIC11.83□□□□□ -0.52
Trav9-1A0A075B601 Gm8655-201ENSMUST00000221159 852 ntBASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms