Protein–RNA interactions for Protein: A0A075B5L3

Igkv4-90, Immunoglobulin kappa chain variable 4-90 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-90A0A075B5L3 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv4-90A0A075B5L3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.75□□□□□ -0.53
Igkv4-90A0A075B5L3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Igkv4-90A0A075B5L3 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv4-90A0A075B5L3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.75□□□□□ -0.53
Igkv4-90A0A075B5L3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv4-90A0A075B5L3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv4-90A0A075B5L3 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Igkv4-90A0A075B5L3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.75□□□□□ -0.53
Igkv4-90A0A075B5L3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Igkv4-90A0A075B5L3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv4-90A0A075B5L3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Igkv4-90A0A075B5L3 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv4-90A0A075B5L3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Gm13418-201ENSMUST00000119097 944 ntBASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Gm2308-201ENSMUST00000166539 1004 ntBASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 AC159106.1-201ENSMUST00000224421 690 ntBASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv4-90A0A075B5L3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Gm43347-201ENSMUST00000200226 580 ntBASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Gm10459-201ENSMUST00000202708 1155 ntBASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC11.73□□□□□ -0.53
Igkv4-90A0A075B5L3 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv4-90A0A075B5L3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Igkv4-90A0A075B5L3 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms