Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Mir8098-201ENSMUST00000184011 137 ntBASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Gm9682-201ENSMUST00000197505 556 ntBASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Gm5864-201ENSMUST00000202263 970 ntBASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
H2afb2S4R1M3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb2S4R1M3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.18■□□□□ 0.02
H2afb2S4R1M3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
H2afb2S4R1M3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb2S4R1M3 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.18■□□□□ 0.02
H2afb2S4R1M3 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb2S4R1M3 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb2S4R1M3 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
H2afb2S4R1M3 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
H2afb2S4R1M3 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb2S4R1M3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.18■□□□□ 0.02
H2afb2S4R1M3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.18■□□□□ 0.02
H2afb2S4R1M3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb2S4R1M3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
H2afb2S4R1M3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb2S4R1M3 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.18■□□□□ 0.02
H2afb2S4R1M3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb2S4R1M3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb2S4R1M3 Gm6550-201ENSMUST00000187574 993 ntBASIC15.18■□□□□ 0.02
H2afb2S4R1M3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.18■□□□□ 0.02
H2afb2S4R1M3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb2S4R1M3 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.18■□□□□ 0.02
H2afb2S4R1M3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb2S4R1M3 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb2S4R1M3 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
H2afb2S4R1M3 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
H2afb2S4R1M3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb2S4R1M3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
H2afb2S4R1M3 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
H2afb2S4R1M3 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb2S4R1M3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb2S4R1M3 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb2S4R1M3 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb2S4R1M3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
H2afb2S4R1M3 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
H2afb2S4R1M3 Gm28659-201ENSMUST00000188013 759 ntBASIC15.17■□□□□ 0.02
H2afb2S4R1M3 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.17■□□□□ 0.02
H2afb2S4R1M3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb2S4R1M3 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
H2afb2S4R1M3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb2S4R1M3 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb2S4R1M3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb2S4R1M3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb2S4R1M3 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb2S4R1M3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb2S4R1M3 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb2S4R1M3 Celf4-206ENSMUST00000224553 1729 ntBASIC15.17■□□□□ 0.02
H2afb2S4R1M3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb2S4R1M3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb2S4R1M3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb2S4R1M3 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.16■□□□□ 0.02
H2afb2S4R1M3 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb2S4R1M3 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb2S4R1M3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb2S4R1M3 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb2S4R1M3 Gm11764-201ENSMUST00000120221 623 ntBASIC15.16■□□□□ 0.02
H2afb2S4R1M3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.16■□□□□ 0.02
H2afb2S4R1M3 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb2S4R1M3 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.16■□□□□ 0.02
H2afb2S4R1M3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb2S4R1M3 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
H2afb2S4R1M3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
H2afb2S4R1M3 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb2S4R1M3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb2S4R1M3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb2S4R1M3 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb2S4R1M3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.16■□□□□ 0.02
H2afb2S4R1M3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb2S4R1M3 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb2S4R1M3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb2S4R1M3 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb2S4R1M3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
H2afb2S4R1M3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms