Protein–RNA interactions for Protein: Q9QZS8

Sh2d3c, SH2 domain-containing protein 3C, mousemouse

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d3cQ9QZS8 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d3cQ9QZS8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 AA414768-201ENSMUST00000121924 1257 ntBASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d3cQ9QZS8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2d3cQ9QZS8 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2d3cQ9QZS8 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2d3cQ9QZS8 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2d3cQ9QZS8 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2d3cQ9QZS8 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2d3cQ9QZS8 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2d3cQ9QZS8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Sh2d3cQ9QZS8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Sh2d3cQ9QZS8 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2d3cQ9QZS8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Sh2d3cQ9QZS8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2d3cQ9QZS8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Sh2d3cQ9QZS8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Sh2d3cQ9QZS8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2d3cQ9QZS8 Gm11355-201ENSMUST00000121120 306 ntBASIC14.84□□□□□ -0.03
Sh2d3cQ9QZS8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.84□□□□□ -0.03
Sh2d3cQ9QZS8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Sh2d3cQ9QZS8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2d3cQ9QZS8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2d3cQ9QZS8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2d3cQ9QZS8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2d3cQ9QZS8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms