Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Chaf1aQ9QWF0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chaf1aQ9QWF0 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Chaf1aQ9QWF0 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chaf1aQ9QWF0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chaf1aQ9QWF0 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.02■□□□□ 0.32
Chaf1aQ9QWF0 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chaf1aQ9QWF0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chaf1aQ9QWF0 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chaf1aQ9QWF0 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Chaf1aQ9QWF0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chaf1aQ9QWF0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.02■□□□□ 0.32
Chaf1aQ9QWF0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Chaf1aQ9QWF0 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Chaf1aQ9QWF0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chaf1aQ9QWF0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chaf1aQ9QWF0 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chaf1aQ9QWF0 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chaf1aQ9QWF0 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chaf1aQ9QWF0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.02■□□□□ 0.32
Chaf1aQ9QWF0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chaf1aQ9QWF0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chaf1aQ9QWF0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chaf1aQ9QWF0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.02■□□□□ 0.32
Chaf1aQ9QWF0 Gm7506-201ENSMUST00000207758 815 ntBASIC17.02■□□□□ 0.32
Chaf1aQ9QWF0 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chaf1aQ9QWF0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chaf1aQ9QWF0 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chaf1aQ9QWF0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chaf1aQ9QWF0 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.02■□□□□ 0.31
Chaf1aQ9QWF0 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chaf1aQ9QWF0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chaf1aQ9QWF0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chaf1aQ9QWF0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chaf1aQ9QWF0 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Chaf1aQ9QWF0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.02■□□□□ 0.31
Chaf1aQ9QWF0 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.02■□□□□ 0.31
Chaf1aQ9QWF0 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chaf1aQ9QWF0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Chaf1aQ9QWF0 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Chaf1aQ9QWF0 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chaf1aQ9QWF0 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chaf1aQ9QWF0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chaf1aQ9QWF0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chaf1aQ9QWF0 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chaf1aQ9QWF0 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chaf1aQ9QWF0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Chaf1aQ9QWF0 Gm15165-201ENSMUST00000118140 502 ntBASIC17.01■□□□□ 0.31
Chaf1aQ9QWF0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chaf1aQ9QWF0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Chaf1aQ9QWF0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Chaf1aQ9QWF0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Chaf1aQ9QWF0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Chaf1aQ9QWF0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chaf1aQ9QWF0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chaf1aQ9QWF0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chaf1aQ9QWF0 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chaf1aQ9QWF0 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Chaf1aQ9QWF0 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chaf1aQ9QWF0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chaf1aQ9QWF0 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Chaf1aQ9QWF0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chaf1aQ9QWF0 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chaf1aQ9QWF0 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Chaf1aQ9QWF0 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chaf1aQ9QWF0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17■□□□□ 0.31
Chaf1aQ9QWF0 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chaf1aQ9QWF0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Chaf1aQ9QWF0 Efs-202ENSMUST00000227037 2540 ntBASIC17■□□□□ 0.31
Chaf1aQ9QWF0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Chaf1aQ9QWF0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Chaf1aQ9QWF0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chaf1aQ9QWF0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chaf1aQ9QWF0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chaf1aQ9QWF0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17■□□□□ 0.31
Chaf1aQ9QWF0 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chaf1aQ9QWF0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Chaf1aQ9QWF0 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chaf1aQ9QWF0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Chaf1aQ9QWF0 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Chaf1aQ9QWF0 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Chaf1aQ9QWF0 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chaf1aQ9QWF0 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chaf1aQ9QWF0 Gm10676-201ENSMUST00000098778 3221 ntBASIC17■□□□□ 0.31
Chaf1aQ9QWF0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chaf1aQ9QWF0 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Chaf1aQ9QWF0 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chaf1aQ9QWF0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chaf1aQ9QWF0 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Chaf1aQ9QWF0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chaf1aQ9QWF0 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chaf1aQ9QWF0 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chaf1aQ9QWF0 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Chaf1aQ9QWF0 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chaf1aQ9QWF0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chaf1aQ9QWF0 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
Chaf1aQ9QWF0 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chaf1aQ9QWF0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chaf1aQ9QWF0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.99■□□□□ 0.31
Chaf1aQ9QWF0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms