Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SrfQ9JM73 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SrfQ9JM73 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SrfQ9JM73 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SrfQ9JM73 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SrfQ9JM73 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SrfQ9JM73 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SrfQ9JM73 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SrfQ9JM73 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SrfQ9JM73 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.25□□□□□ -0.13
SrfQ9JM73 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SrfQ9JM73 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SrfQ9JM73 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SrfQ9JM73 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SrfQ9JM73 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.24□□□□□ -0.13
SrfQ9JM73 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SrfQ9JM73 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SrfQ9JM73 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.24□□□□□ -0.13
SrfQ9JM73 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SrfQ9JM73 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SrfQ9JM73 Gm5566-201ENSMUST00000116118 459 ntBASIC14.24□□□□□ -0.13
SrfQ9JM73 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SrfQ9JM73 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.24□□□□□ -0.13
SrfQ9JM73 Gm16215-201ENSMUST00000161990 637 ntBASIC14.24□□□□□ -0.13
SrfQ9JM73 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SrfQ9JM73 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SrfQ9JM73 Gm43767-201ENSMUST00000198933 381 ntBASIC14.24□□□□□ -0.13
SrfQ9JM73 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.24□□□□□ -0.13
SrfQ9JM73 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.24□□□□□ -0.13
SrfQ9JM73 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SrfQ9JM73 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SrfQ9JM73 Syt7-205ENSMUST00000224135 1557 ntBASIC14.24□□□□□ -0.13
SrfQ9JM73 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SrfQ9JM73 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.24□□□□□ -0.13
SrfQ9JM73 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SrfQ9JM73 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SrfQ9JM73 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SrfQ9JM73 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SrfQ9JM73 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SrfQ9JM73 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.24□□□□□ -0.13
SrfQ9JM73 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SrfQ9JM73 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SrfQ9JM73 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
SrfQ9JM73 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SrfQ9JM73 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SrfQ9JM73 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SrfQ9JM73 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SrfQ9JM73 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SrfQ9JM73 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SrfQ9JM73 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SrfQ9JM73 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SrfQ9JM73 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SrfQ9JM73 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SrfQ9JM73 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SrfQ9JM73 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SrfQ9JM73 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SrfQ9JM73 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SrfQ9JM73 Gm15487-201ENSMUST00000122373 465 ntBASIC14.23□□□□□ -0.13
SrfQ9JM73 Gm9719-201ENSMUST00000162765 543 ntBASIC14.23□□□□□ -0.13
SrfQ9JM73 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SrfQ9JM73 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SrfQ9JM73 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SrfQ9JM73 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SrfQ9JM73 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.23□□□□□ -0.13
SrfQ9JM73 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC14.23□□□□□ -0.13
SrfQ9JM73 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SrfQ9JM73 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SrfQ9JM73 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SrfQ9JM73 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SrfQ9JM73 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SrfQ9JM73 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SrfQ9JM73 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SrfQ9JM73 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SrfQ9JM73 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SrfQ9JM73 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SrfQ9JM73 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SrfQ9JM73 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SrfQ9JM73 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SrfQ9JM73 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SrfQ9JM73 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SrfQ9JM73 Gm24543-201ENSMUST00000103867 82 ntBASIC14.22□□□□□ -0.13
SrfQ9JM73 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SrfQ9JM73 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SrfQ9JM73 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SrfQ9JM73 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SrfQ9JM73 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SrfQ9JM73 Gm43438-201ENSMUST00000198133 379 ntBASIC14.22□□□□□ -0.13
SrfQ9JM73 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.22□□□□□ -0.13
SrfQ9JM73 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.22□□□□□ -0.13
SrfQ9JM73 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.22□□□□□ -0.13
SrfQ9JM73 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SrfQ9JM73 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SrfQ9JM73 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SrfQ9JM73 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SrfQ9JM73 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SrfQ9JM73 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SrfQ9JM73 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.22□□□□□ -0.13
SrfQ9JM73 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
SrfQ9JM73 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SrfQ9JM73 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms