Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn5Q9JL35 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn5Q9JL35 Gm21559-201ENSMUST00000220638 855 ntBASIC17.08■□□□□ 0.32
Hmgn5Q9JL35 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Hmgn5Q9JL35 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.08■□□□□ 0.32
Hmgn5Q9JL35 Gm8587-201ENSMUST00000076538 843 ntBASIC17.08■□□□□ 0.32
Hmgn5Q9JL35 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn5Q9JL35 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn5Q9JL35 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn5Q9JL35 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Hmgn5Q9JL35 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn5Q9JL35 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn5Q9JL35 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn5Q9JL35 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn5Q9JL35 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn5Q9JL35 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn5Q9JL35 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn5Q9JL35 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn5Q9JL35 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn5Q9JL35 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Hmgn5Q9JL35 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn5Q9JL35 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn5Q9JL35 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn5Q9JL35 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn5Q9JL35 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn5Q9JL35 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn5Q9JL35 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Hmgn5Q9JL35 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn5Q9JL35 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn5Q9JL35 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn5Q9JL35 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn5Q9JL35 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn5Q9JL35 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.07■□□□□ 0.32
Hmgn5Q9JL35 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.07■□□□□ 0.32
Hmgn5Q9JL35 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn5Q9JL35 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn5Q9JL35 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Hmgn5Q9JL35 Gm21451-201ENSMUST00000111062 2775 ntBASIC17.07■□□□□ 0.32
Hmgn5Q9JL35 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn5Q9JL35 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn5Q9JL35 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn5Q9JL35 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn5Q9JL35 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn5Q9JL35 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.07■□□□□ 0.32
Hmgn5Q9JL35 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn5Q9JL35 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn5Q9JL35 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn5Q9JL35 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn5Q9JL35 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn5Q9JL35 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn5Q9JL35 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn5Q9JL35 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn5Q9JL35 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn5Q9JL35 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn5Q9JL35 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn5Q9JL35 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Hmgn5Q9JL35 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn5Q9JL35 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn5Q9JL35 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn5Q9JL35 Gm23547-201ENSMUST00000158210 271 ntBASIC17.06■□□□□ 0.32
Hmgn5Q9JL35 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.06■□□□□ 0.32
Hmgn5Q9JL35 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn5Q9JL35 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn5Q9JL35 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn5Q9JL35 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn5Q9JL35 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.06■□□□□ 0.32
Hmgn5Q9JL35 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn5Q9JL35 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn5Q9JL35 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Hmgn5Q9JL35 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn5Q9JL35 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn5Q9JL35 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn5Q9JL35 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Hmgn5Q9JL35 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 Gm13559-201ENSMUST00000120476 863 ntBASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 Gm18959-201ENSMUST00000208954 655 ntBASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 Gm10812-201ENSMUST00000099864 546 ntBASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms