Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClpxQ9JHS4 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClpxQ9JHS4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ClpxQ9JHS4 Gm9103-201ENSMUST00000119371 405 ntBASIC13.92□□□□□ -0.18
ClpxQ9JHS4 Mir3081-201ENSMUST00000175305 84 ntBASIC13.92□□□□□ -0.18
ClpxQ9JHS4 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.92□□□□□ -0.18
ClpxQ9JHS4 Ank2-226ENSMUST00000189368 339 ntBASIC13.92□□□□□ -0.18
ClpxQ9JHS4 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
ClpxQ9JHS4 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ClpxQ9JHS4 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
ClpxQ9JHS4 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.92□□□□□ -0.18
ClpxQ9JHS4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
ClpxQ9JHS4 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
ClpxQ9JHS4 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClpxQ9JHS4 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClpxQ9JHS4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ClpxQ9JHS4 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ClpxQ9JHS4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ClpxQ9JHS4 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClpxQ9JHS4 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ClpxQ9JHS4 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClpxQ9JHS4 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClpxQ9JHS4 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
ClpxQ9JHS4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ClpxQ9JHS4 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClpxQ9JHS4 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClpxQ9JHS4 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ClpxQ9JHS4 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpxQ9JHS4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpxQ9JHS4 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpxQ9JHS4 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpxQ9JHS4 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpxQ9JHS4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpxQ9JHS4 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ClpxQ9JHS4 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.91□□□□□ -0.18
ClpxQ9JHS4 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.91□□□□□ -0.18
ClpxQ9JHS4 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpxQ9JHS4 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpxQ9JHS4 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.91□□□□□ -0.18
ClpxQ9JHS4 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpxQ9JHS4 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
ClpxQ9JHS4 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpxQ9JHS4 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpxQ9JHS4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ClpxQ9JHS4 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
ClpxQ9JHS4 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpxQ9JHS4 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpxQ9JHS4 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
ClpxQ9JHS4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpxQ9JHS4 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ClpxQ9JHS4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpxQ9JHS4 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpxQ9JHS4 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
ClpxQ9JHS4 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpxQ9JHS4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpxQ9JHS4 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpxQ9JHS4 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
ClpxQ9JHS4 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.9□□□□□ -0.18
ClpxQ9JHS4 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpxQ9JHS4 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpxQ9JHS4 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.9□□□□□ -0.18
ClpxQ9JHS4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
ClpxQ9JHS4 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.9□□□□□ -0.18
ClpxQ9JHS4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ClpxQ9JHS4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ClpxQ9JHS4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
ClpxQ9JHS4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpxQ9JHS4 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.9□□□□□ -0.18
ClpxQ9JHS4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpxQ9JHS4 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.9□□□□□ -0.18
ClpxQ9JHS4 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpxQ9JHS4 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpxQ9JHS4 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpxQ9JHS4 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ClpxQ9JHS4 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpxQ9JHS4 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
ClpxQ9JHS4 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpxQ9JHS4 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpxQ9JHS4 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
ClpxQ9JHS4 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ClpxQ9JHS4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.19
ClpxQ9JHS4 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
ClpxQ9JHS4 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClpxQ9JHS4 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClpxQ9JHS4 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
ClpxQ9JHS4 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClpxQ9JHS4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClpxQ9JHS4 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClpxQ9JHS4 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClpxQ9JHS4 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClpxQ9JHS4 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClpxQ9JHS4 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ClpxQ9JHS4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ClpxQ9JHS4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.89□□□□□ -0.19
ClpxQ9JHS4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.89□□□□□ -0.19
ClpxQ9JHS4 Mir6404-201ENSMUST00000183699 94 ntBASIC13.89□□□□□ -0.19
ClpxQ9JHS4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.89□□□□□ -0.19
ClpxQ9JHS4 Gm18669-201ENSMUST00000216049 778 ntBASIC13.89□□□□□ -0.19
ClpxQ9JHS4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.89□□□□□ -0.19
ClpxQ9JHS4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms