Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim39Q9ESN2 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Trim39Q9ESN2 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim39Q9ESN2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim39Q9ESN2 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim39Q9ESN2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trim39Q9ESN2 Gm13323-201ENSMUST00000120245 1151 ntBASIC14.23□□□□□ -0.13
Trim39Q9ESN2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim39Q9ESN2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim39Q9ESN2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim39Q9ESN2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim39Q9ESN2 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.23□□□□□ -0.13
Trim39Q9ESN2 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC14.23□□□□□ -0.13
Trim39Q9ESN2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim39Q9ESN2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim39Q9ESN2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim39Q9ESN2 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim39Q9ESN2 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim39Q9ESN2 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim39Q9ESN2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim39Q9ESN2 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim39Q9ESN2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim39Q9ESN2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim39Q9ESN2 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim39Q9ESN2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim39Q9ESN2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim39Q9ESN2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim39Q9ESN2 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim39Q9ESN2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim39Q9ESN2 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.22□□□□□ -0.13
Trim39Q9ESN2 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim39Q9ESN2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trim39Q9ESN2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Trim39Q9ESN2 Gm11434-201ENSMUST00000122379 629 ntBASIC14.22□□□□□ -0.13
Trim39Q9ESN2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.22□□□□□ -0.13
Trim39Q9ESN2 Gm25406-201ENSMUST00000157599 105 ntBASIC14.22□□□□□ -0.13
Trim39Q9ESN2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim39Q9ESN2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Trim39Q9ESN2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trim39Q9ESN2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Trim39Q9ESN2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Trim39Q9ESN2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.22□□□□□ -0.13
Trim39Q9ESN2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim39Q9ESN2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim39Q9ESN2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim39Q9ESN2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim39Q9ESN2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim39Q9ESN2 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim39Q9ESN2 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim39Q9ESN2 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim39Q9ESN2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim39Q9ESN2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim39Q9ESN2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim39Q9ESN2 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim39Q9ESN2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim39Q9ESN2 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.21□□□□□ -0.13
Trim39Q9ESN2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim39Q9ESN2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim39Q9ESN2 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim39Q9ESN2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Trim39Q9ESN2 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim39Q9ESN2 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim39Q9ESN2 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Trim39Q9ESN2 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim39Q9ESN2 Gm15165-201ENSMUST00000118140 502 ntBASIC14.21□□□□□ -0.13
Trim39Q9ESN2 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim39Q9ESN2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.21□□□□□ -0.13
Trim39Q9ESN2 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.21□□□□□ -0.13
Trim39Q9ESN2 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.21□□□□□ -0.13
Trim39Q9ESN2 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.21□□□□□ -0.13
Trim39Q9ESN2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim39Q9ESN2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim39Q9ESN2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.21□□□□□ -0.13
Trim39Q9ESN2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim39Q9ESN2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim39Q9ESN2 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim39Q9ESN2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim39Q9ESN2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim39Q9ESN2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim39Q9ESN2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim39Q9ESN2 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.21□□□□□ -0.14
Trim39Q9ESN2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.21□□□□□ -0.14
Trim39Q9ESN2 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trim39Q9ESN2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim39Q9ESN2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim39Q9ESN2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Trim39Q9ESN2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Trim39Q9ESN2 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trim39Q9ESN2 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim39Q9ESN2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim39Q9ESN2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim39Q9ESN2 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim39Q9ESN2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim39Q9ESN2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim39Q9ESN2 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim39Q9ESN2 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim39Q9ESN2 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim39Q9ESN2 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim39Q9ESN2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim39Q9ESN2 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms