Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.36□□□□□ -0.11
Ska1Q9CPV1 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ska1Q9CPV1 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ska1Q9CPV1 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ska1Q9CPV1 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ska1Q9CPV1 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ska1Q9CPV1 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ska1Q9CPV1 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ska1Q9CPV1 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ska1Q9CPV1 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ska1Q9CPV1 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.35□□□□□ -0.11
Ska1Q9CPV1 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ska1Q9CPV1 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ska1Q9CPV1 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ska1Q9CPV1 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ska1Q9CPV1 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ska1Q9CPV1 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ska1Q9CPV1 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ska1Q9CPV1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.35□□□□□ -0.11
Ska1Q9CPV1 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.35□□□□□ -0.11
Ska1Q9CPV1 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ska1Q9CPV1 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ska1Q9CPV1 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ska1Q9CPV1 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ska1Q9CPV1 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ska1Q9CPV1 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ska1Q9CPV1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ska1Q9CPV1 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.35□□□□□ -0.11
Ska1Q9CPV1 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ska1Q9CPV1 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.34□□□□□ -0.11
Ska1Q9CPV1 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ska1Q9CPV1 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ska1Q9CPV1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ska1Q9CPV1 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ska1Q9CPV1 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ska1Q9CPV1 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Ska1Q9CPV1 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ska1Q9CPV1 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ska1Q9CPV1 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ska1Q9CPV1 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ska1Q9CPV1 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ska1Q9CPV1 Gm12134-201ENSMUST00000122109 520 ntBASIC14.33□□□□□ -0.12
Ska1Q9CPV1 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.33□□□□□ -0.12
Ska1Q9CPV1 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ska1Q9CPV1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ska1Q9CPV1 Gm27742-201ENSMUST00000184667 60 ntBASIC14.33□□□□□ -0.12
Ska1Q9CPV1 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.33□□□□□ -0.12
Ska1Q9CPV1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ska1Q9CPV1 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ska1Q9CPV1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ska1Q9CPV1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ska1Q9CPV1 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ska1Q9CPV1 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ska1Q9CPV1 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.33□□□□□ -0.12
Ska1Q9CPV1 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ska1Q9CPV1 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ska1Q9CPV1 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ska1Q9CPV1 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ska1Q9CPV1 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ska1Q9CPV1 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ska1Q9CPV1 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ska1Q9CPV1 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ska1Q9CPV1 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms