Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Cdh23Q99PF4 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.27■□□□□ 0.03
Cdh23Q99PF4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cdh23Q99PF4 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh23Q99PF4 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh23Q99PF4 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh23Q99PF4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh23Q99PF4 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh23Q99PF4 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh23Q99PF4 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh23Q99PF4 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh23Q99PF4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh23Q99PF4 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cdh23Q99PF4 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh23Q99PF4 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cdh23Q99PF4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh23Q99PF4 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh23Q99PF4 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cdh23Q99PF4 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh23Q99PF4 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC15.26■□□□□ 0.03
Cdh23Q99PF4 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh23Q99PF4 Gm6244-201ENSMUST00000178732 841 ntBASIC15.26■□□□□ 0.03
Cdh23Q99PF4 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh23Q99PF4 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh23Q99PF4 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC15.26■□□□□ 0.03
Cdh23Q99PF4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh23Q99PF4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh23Q99PF4 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC15.25■□□□□ 0.03
Cdh23Q99PF4 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.25■□□□□ 0.03
Cdh23Q99PF4 Gm2495-201ENSMUST00000191160 466 ntBASIC15.25■□□□□ 0.03
Cdh23Q99PF4 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh23Q99PF4 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
Cdh23Q99PF4 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.25■□□□□ 0.03
Cdh23Q99PF4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh23Q99PF4 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh23Q99PF4 Gm14660-201ENSMUST00000119809 575 ntBASIC15.25■□□□□ 0.03
Cdh23Q99PF4 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.25■□□□□ 0.03
Cdh23Q99PF4 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.25■□□□□ 0.03
Cdh23Q99PF4 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.25■□□□□ 0.03
Cdh23Q99PF4 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.25■□□□□ 0.03
Cdh23Q99PF4 Dancr-204ENSMUST00000132389 2347 ntBASIC15.25■□□□□ 0.03
Cdh23Q99PF4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh23Q99PF4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh23Q99PF4 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh23Q99PF4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh23Q99PF4 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh23Q99PF4 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh23Q99PF4 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Cdh23Q99PF4 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.24■□□□□ 0.03
Cdh23Q99PF4 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh23Q99PF4 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.24■□□□□ 0.03
Cdh23Q99PF4 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh23Q99PF4 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh23Q99PF4 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh23Q99PF4 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh23Q99PF4 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh23Q99PF4 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh23Q99PF4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.24■□□□□ 0.03
Cdh23Q99PF4 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh23Q99PF4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cdh23Q99PF4 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Cdh23Q99PF4 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cdh23Q99PF4 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC15.24■□□□□ 0.03
Cdh23Q99PF4 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh23Q99PF4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh23Q99PF4 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cdh23Q99PF4 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh23Q99PF4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh23Q99PF4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh23Q99PF4 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Cdh23Q99PF4 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh23Q99PF4 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.24■□□□□ 0.03
Cdh23Q99PF4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh23Q99PF4 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh23Q99PF4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh23Q99PF4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh23Q99PF4 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cdh23Q99PF4 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh23Q99PF4 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.23■□□□□ 0.03
Cdh23Q99PF4 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.23■□□□□ 0.03
Cdh23Q99PF4 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.23■□□□□ 0.03
Cdh23Q99PF4 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh23Q99PF4 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.23■□□□□ 0.03
Cdh23Q99PF4 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.23■□□□□ 0.03
Cdh23Q99PF4 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC15.23■□□□□ 0.03
Cdh23Q99PF4 Gm46209-201ENSMUST00000217912 553 ntBASIC15.23■□□□□ 0.03
Cdh23Q99PF4 AC154171.1-201ENSMUST00000224610 643 ntBASIC15.23■□□□□ 0.03
Cdh23Q99PF4 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh23Q99PF4 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh23Q99PF4 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC15.23■□□□□ 0.03
Cdh23Q99PF4 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh23Q99PF4 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh23Q99PF4 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh23Q99PF4 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh23Q99PF4 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh23Q99PF4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.23■□□□□ 0.03
Cdh23Q99PF4 Gm4984-201ENSMUST00000115987 360 ntBASIC15.23■□□□□ 0.03
Cdh23Q99PF4 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cdh23Q99PF4 Gm16476-201ENSMUST00000221544 139 ntBASIC15.23■□□□□ 0.03
Cdh23Q99PF4 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms