Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tlr3Q99MB1 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tlr3Q99MB1 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.28■□□□□ 0.2
Tlr3Q99MB1 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tlr3Q99MB1 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.28■□□□□ 0.2
Tlr3Q99MB1 Gm2756-201ENSMUST00000195851 400 ntBASIC16.28■□□□□ 0.2
Tlr3Q99MB1 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tlr3Q99MB1 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tlr3Q99MB1 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tlr3Q99MB1 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Tlr3Q99MB1 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tlr3Q99MB1 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Tlr3Q99MB1 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tlr3Q99MB1 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tlr3Q99MB1 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.28■□□□□ 0.2
Tlr3Q99MB1 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tlr3Q99MB1 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tlr3Q99MB1 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tlr3Q99MB1 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Tlr3Q99MB1 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.27■□□□□ 0.2
Tlr3Q99MB1 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tlr3Q99MB1 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tlr3Q99MB1 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tlr3Q99MB1 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tlr3Q99MB1 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Tlr3Q99MB1 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tlr3Q99MB1 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tlr3Q99MB1 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tlr3Q99MB1 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Tlr3Q99MB1 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tlr3Q99MB1 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tlr3Q99MB1 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Tlr3Q99MB1 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.27■□□□□ 0.2
Tlr3Q99MB1 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tlr3Q99MB1 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tlr3Q99MB1 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tlr3Q99MB1 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.27■□□□□ 0.2
Tlr3Q99MB1 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.27■□□□□ 0.2
Tlr3Q99MB1 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tlr3Q99MB1 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.27■□□□□ 0.2
Tlr3Q99MB1 Gm45167-201ENSMUST00000208007 322 ntBASIC16.27■□□□□ 0.2
Tlr3Q99MB1 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tlr3Q99MB1 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Tlr3Q99MB1 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tlr3Q99MB1 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tlr3Q99MB1 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tlr3Q99MB1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tlr3Q99MB1 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tlr3Q99MB1 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tlr3Q99MB1 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tlr3Q99MB1 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tlr3Q99MB1 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.26■□□□□ 0.19
Tlr3Q99MB1 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tlr3Q99MB1 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Tlr3Q99MB1 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tlr3Q99MB1 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tlr3Q99MB1 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tlr3Q99MB1 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.25■□□□□ 0.19
Tlr3Q99MB1 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tlr3Q99MB1 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Tlr3Q99MB1 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tlr3Q99MB1 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tlr3Q99MB1 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tlr3Q99MB1 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tlr3Q99MB1 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.25■□□□□ 0.19
Tlr3Q99MB1 Gm13036-201ENSMUST00000117799 748 ntBASIC16.25■□□□□ 0.19
Tlr3Q99MB1 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.25■□□□□ 0.19
Tlr3Q99MB1 Gm43575-201ENSMUST00000196420 516 ntBASIC16.25■□□□□ 0.19
Tlr3Q99MB1 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.25■□□□□ 0.19
Tlr3Q99MB1 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.25■□□□□ 0.19
Tlr3Q99MB1 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms