Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Nkx6-1Q99MA9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Gm15487-201ENSMUST00000122373 465 ntBASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Gm25144-201ENSMUST00000179561 110 ntBASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Gm25352-201ENSMUST00000179815 110 ntBASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Gm18187-201ENSMUST00000196476 984 ntBASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Dancr-204ENSMUST00000132389 2347 ntBASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-1Q99MA9 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-1Q99MA9 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-1Q99MA9 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.18□□□□□ -0.14
Nkx6-1Q99MA9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-1Q99MA9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nkx6-1Q99MA9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-1Q99MA9 Gm14719-201ENSMUST00000121891 340 ntBASIC14.18□□□□□ -0.14
Nkx6-1Q99MA9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-1Q99MA9 Gm16026-204ENSMUST00000162652 683 ntBASIC14.18□□□□□ -0.14
Nkx6-1Q99MA9 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.18□□□□□ -0.14
Nkx6-1Q99MA9 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nkx6-1Q99MA9 Gm18049-201ENSMUST00000208909 581 ntBASIC14.18□□□□□ -0.14
Nkx6-1Q99MA9 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-1Q99MA9 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nkx6-1Q99MA9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nkx6-1Q99MA9 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.18□□□□□ -0.14
Nkx6-1Q99MA9 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-1Q99MA9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.18□□□□□ -0.14
Nkx6-1Q99MA9 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-1Q99MA9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-1Q99MA9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nkx6-1Q99MA9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-1Q99MA9 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-1Q99MA9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nkx6-1Q99MA9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-1Q99MA9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-1Q99MA9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.18□□□□□ -0.14
Nkx6-1Q99MA9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Nkx6-1Q99MA9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms