Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp1b1Q99LU0 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp1b1Q99LU0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Gm27459-201ENSMUST00000184860 107 ntBASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp1b1Q99LU0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp1b1Q99LU0 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp1b1Q99LU0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp1b1Q99LU0 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp1b1Q99LU0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Chmp1b1Q99LU0 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Chmp1b1Q99LU0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp1b1Q99LU0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp1b1Q99LU0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp1b1Q99LU0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.34□□□□□ -0.11
Chmp1b1Q99LU0 Mir8098-201ENSMUST00000184011 137 ntBASIC14.34□□□□□ -0.11
Chmp1b1Q99LU0 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.34□□□□□ -0.11
Chmp1b1Q99LU0 Gm34391-201ENSMUST00000203706 907 ntBASIC14.34□□□□□ -0.11
Chmp1b1Q99LU0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.34□□□□□ -0.11
Chmp1b1Q99LU0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms