Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clcc1Q99LI2 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Clcc1Q99LI2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clcc1Q99LI2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Clcc1Q99LI2 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Clcc1Q99LI2 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Clcc1Q99LI2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clcc1Q99LI2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Clcc1Q99LI2 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clcc1Q99LI2 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clcc1Q99LI2 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Clcc1Q99LI2 Gm14701-201ENSMUST00000117156 348 ntBASIC14.99□□□□□ -0.01
Clcc1Q99LI2 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.99□□□□□ -0.01
Clcc1Q99LI2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Clcc1Q99LI2 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Clcc1Q99LI2 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clcc1Q99LI2 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clcc1Q99LI2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clcc1Q99LI2 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clcc1Q99LI2 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Clcc1Q99LI2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clcc1Q99LI2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Clcc1Q99LI2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.99□□□□□ -0.01
Clcc1Q99LI2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.98□□□□□ -0.01
Clcc1Q99LI2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.98□□□□□ -0.01
Clcc1Q99LI2 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clcc1Q99LI2 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clcc1Q99LI2 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Clcc1Q99LI2 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Clcc1Q99LI2 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Clcc1Q99LI2 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clcc1Q99LI2 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Clcc1Q99LI2 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.97□□□□□ -0.01
Clcc1Q99LI2 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.97□□□□□ -0.01
Clcc1Q99LI2 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Clcc1Q99LI2 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clcc1Q99LI2 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clcc1Q99LI2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clcc1Q99LI2 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clcc1Q99LI2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clcc1Q99LI2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clcc1Q99LI2 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clcc1Q99LI2 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clcc1Q99LI2 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Clcc1Q99LI2 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clcc1Q99LI2 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Clcc1Q99LI2 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clcc1Q99LI2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clcc1Q99LI2 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clcc1Q99LI2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Clcc1Q99LI2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Clcc1Q99LI2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clcc1Q99LI2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clcc1Q99LI2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Clcc1Q99LI2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Clcc1Q99LI2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clcc1Q99LI2 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.96□□□□□ -0.01
Clcc1Q99LI2 Gm27301-201ENSMUST00000184012 127 ntBASIC14.96□□□□□ -0.01
Clcc1Q99LI2 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Clcc1Q99LI2 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Clcc1Q99LI2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.96□□□□□ -0.01
Clcc1Q99LI2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.96□□□□□ -0.01
Clcc1Q99LI2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clcc1Q99LI2 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clcc1Q99LI2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Clcc1Q99LI2 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clcc1Q99LI2 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clcc1Q99LI2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Clcc1Q99LI2 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Clcc1Q99LI2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms